Limnohabitans sp. MORI2: LMORI2_06960
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Entry
LMORI2_06960 CDS
T11141
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm00020
Citrate cycle (TCA cycle)
limm00190
Oxidative phosphorylation
limm00650
Butanoate metabolism
limm00720
Other carbon fixation pathways
limm01100
Metabolic pathways
limm01110
Biosynthesis of secondary metabolites
limm01120
Microbial metabolism in diverse environments
limm01200
Carbon metabolism
Module
limm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
limm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LMORI2_06960 (sdhA)
00650 Butanoate metabolism
LMORI2_06960 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LMORI2_06960 (sdhA)
00720 Other carbon fixation pathways
LMORI2_06960 (sdhA)
Enzymes [BR:
limm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LMORI2_06960 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_7
DUF749
ThiF
Motif
Other DBs
NCBI-ProteinID:
BDU57714
LinkDB
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Position
complement(687986..689788)
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AA seq
600 aa
AA seq
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MTVKSSIPRRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVSAS
LGNMSEDNWEYHFYDTVKGSDWLGDQDAIEYMCREAPKVVYELEHMGMPFDRNADGTIYQ
RPFGGHTANFGEKPVQRACAAADRTGHAMLHTLYQANVAARTTFFVEWMALDLIRNADGD
VVGVTALEMETGDVYELQAQTVLFATGGAGRIFQSSTNAFINTGDGLGMAARAGIALQDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILLNSEGERFMERYAPTLKDLAPRDFVSRCMGQE
ILEGRGCGPNKDYIHMKLDHLGADTIRKRLPSVEEIGHNFANVDITKEPIPVVPTIHYQM
GGIPTNIHGQVVEQVNGEDKPVKGLYAVGECSCVSVHGANRLGTNSLLDLLVFGKAAGDH
IIANTVAGATQADLPANASDFTLARLARLENNKNGEYAQDIANDMRAIMQTHAGVFRSQE
SMDEGVRKIAELRARVANIGLKDNSKVFNTARIEALEVDNLMEAAQATMESAAARKECRG
AHLVRDYEHDVTHPTCPLGRNDAEWMKHTLWHSANNSLTYKPVRMKPLTAETVPPKPRTF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaaaagctctatcccacgtcgcaagtttgatgtggtcatcgtcggtgccggt
ggctctggcatgcgtgcatcgttgcaacttgctcgcgcaggtttgaacgttgctgttttg
tctaaagtgttccccactcgctcgcacaccgtggcagcgcaaggcggcgtgtctgcctct
ttgggcaacatgtctgaagacaactgggaatatcacttctacgacaccgtcaaaggctcc
gactggctcggcgaccaagacgcgatcgaatacatgtgtcgtgaagcgcccaaagtcgtg
tacgaactcgaacacatgggcatgcctttcgaccgcaacgccgacggcaccatttaccaa
cgtcctttcggcggccacaccgccaactttggtgaaaagcctgtgcaacgtgcttgtgct
gcggctgaccgtacaggccacgccatgctgcacaccttgtaccaagccaacgtggcagcc
cgcaccactttctttgtggagtggatggcgcttgatttgatccgcaacgccgacggcgat
gtggtgggcgtgaccgcgcttgaaatggaaactggcgacgtgtacgagttgcaagcgcaa
accgtgttgttcgccacaggcggcgctggccgtatcttccaatcgtccaccaacgcgttc
atcaacaccggtgacggcttgggcatggctgctcgcgcaggcattgctttgcaagacatg
gaattctggcaattccaccccactggcgtggccggtgctggcgtgttgttgaccgaaggc
tgccgcggcgaaggcgcgattttgctcaacagcgaaggcgagcgcttcatggagcgctat
gcgcccacactgaaagacttggcaccccgcgacttcgtgtcacgctgcatgggccaagaa
attttggaaggtcgcggctgcggtcctaacaaagactacatccacatgaagttggaccac
ttgggcgccgacaccatccgcaagcgtttgccttcggtggaagaaattggccacaacttt
gccaacgtcgacatcaccaaagagcctattcctgtggtgcctaccatccactatcaaatg
ggtggcattccaaccaacatccacggtcaagtggtggaacaagtcaacggcgaagacaaa
cccgtcaagggcctctacgctgtgggcgagtgttcatgtgtgtcggtgcacggcgccaac
cgcttgggtactaactccttgctcgatttgttggtattcggcaaagctgctggcgaccac
atcattgccaacacagtggccggcgctacacaagccgacttgccagcgaacgcatctgac
ttcaccttggcacgtttggcccgcttggaaaacaacaagaacggcgaatacgcccaagac
atcgccaacgacatgcgcgccatcatgcaaacgcatgctggcgtgttccgtagccaagag
tccatggacgaaggcgtgcgcaagatcgctgagttgcgtgctcgcgtggccaacattggc
ctcaaagacaactccaaagtcttcaacaccgcacgcatcgaagccttggaagtggacaac
ctcatggaagccgcccaggccaccatggagtctgccgctgctcgtaaagagtgccgtggc
gcccacttggtccgcgactacgaacacgatgtgactcaccccacctgccctctgggccgc
aacgatgctgagtggatgaagcacaccttgtggcacagcgccaacaacagcttgacttac
aagcccgtgcgcatgaagcctttgacggctgaaaccgtgccacccaagccccgtacgttc
taa
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