Limnohabitans sp. MORI2: LMORI2_07180
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Entry
LMORI2_07180 CDS
T11141
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMORI2_07180 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
limm03019
]
LMORI2_07180 (pcnB)
Enzymes [BR:
limm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LMORI2_07180 (pcnB)
Messenger RNA biogenesis [BR:
limm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMORI2_07180 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
BDU57736
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All DBs
Position
710046..711590
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AA seq
514 aa
AA seq
DB search
MIKHFINKLMGKTSSSHKPDLGKRHVVPAKVHGINVDWVDERALNVVRTLQDRGFEAYIV
GGAVRDLLLGLKPKDFDVATNATPEQVKAAFRRAFIIGRRFRIVHVVYGRGREHEVIEVS
TFRAHLDNADAEKVKGNERTSKRQLEGIQHAVDASGRVLRDNVWGPQDQDAARRDFTINA
MYYDPETGNVIDYHGGIADAKKKVIRMIGDPAARYREDPVRVIRAVRFAAKLSGLGFKME
AKTAAPLKKAAKLLADVPQSRLFDEMLKLLQTGHALASIAQLKQHGLAKGIYPLLDIVVD
RSDEQFVQTALNDTDRRVSEGKPVAPSFLLACVLWSDVREVWAQRRAKQPSFPALQDAID
EVFDSRIGDVSGRGKLGADMREIWMMQPRFEKRTGSGPWTLVDQSRFRAGFDFMRLRADV
GEVDESLSDWWQEFSTASDSVREDLLQQVRQEQQKAQRAPRVHSVRRAPKPEAEDPRFRE
LAPEGEEGAVAPARKRRRRRRKPTGEAGGAPAAE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacacttcatcaacaagctgatgggcaaaacgtccagcagccacaagccagac
ttgggcaagcgccatgtggtgccagccaaagtgcatggcatcaatgtcgactgggtcgac
gagcgcgccctgaacgtggtgcgcaccctgcaagaccgaggctttgaggcctacatcgtg
ggcggagccgtgcgcgatttgttgcttggcttgaagcccaaagactttgacgtggccacc
aacgccacgcccgagcaagtcaaagcggcattccgccgtgctttcatcattggccgccgt
ttccgtatcgtgcatgtggtgtatggccgaggccgtgagcatgaagtgattgaggtgtct
accttccgtgcacacctcgataacgcagacgccgaaaaagtcaaaggcaacgagcgcacc
agcaagcgccaacttgaaggcattcaacacgcggtagacgccagcggccgagtgctgcgt
gacaacgtgtgggggccgcaagaccaagacgcggcacgccgcgacttcaccatcaacgcc
atgtattacgaccccgaaacgggcaacgtgattgactaccacggcggcattgccgacgcg
aagaaaaaagtcatccgcatgattggcgaccccgccgcccgctaccgcgaagaccccgtg
cgcgtgattcgtgctgtgcgttttgcggccaagctctcgggtttaggtttcaagatggaa
gccaaaacagccgcgccgttgaagaaagccgccaagctcttggccgatgtgccgcagagc
cgcttgtttgacgaaatgctcaagctcttgcaaacggggcacgcgctggccagtattgcg
cagctcaagcagcacggtttagccaaaggcatctacccgctgctcgacatcgtggtggac
cgctcagacgaacaatttgtgcaaaccgctttgaacgataccgaccgtcgcgtgagcgaa
ggcaagcccgtggcgcccagcttcttgctggcttgtgtgctgtggtcggatgtgcgcgaa
gtgtgggcgcaacgccgcgccaagcagccgtctttccctgccttgcaagatgcgattgac
gaagtgtttgattcgcgcattggtgatgtgtcgggacgcggcaagctcggtgccgatatg
cgcgaaatttggatgatgcagccgcgctttgaaaagcgcaccggcagcggcccttggact
ttggtggaccaatcgcgcttccgtgctggctttgacttcatgcgtctgcgtgccgatgtg
ggcgaggtcgatgaatccttgtcggattggtggcaagagttcagcacagccagcgacagc
gtgcgcgaagacctgttgcagcaagtgcgccaagaacaacaaaaagcccaacgcgcaccc
cgcgtgcattcggtgcgtcgtgcccctaagcccgaagctgaagatccccgctttcgtgag
ctggcacccgaaggtgaagagggcgcagtcgcacctgccagaaaacgccgccgtcgccgt
cgtaagcccacaggtgaagcaggcggcgcacccgccgccgagtaa
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