Limnohabitans sp. MORI2: LMORI2_07470
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Entry
LMORI2_07470 CDS
T11141
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm03030
DNA replication
limm03410
Base excision repair
limm03420
Nucleotide excision repair
limm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMORI2_07470 (polA)
03410 Base excision repair
LMORI2_07470 (polA)
03420 Nucleotide excision repair
LMORI2_07470 (polA)
03440 Homologous recombination
LMORI2_07470 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limm03032
]
LMORI2_07470 (polA)
03400 DNA repair and recombination proteins [BR:
limm03400
]
LMORI2_07470 (polA)
Enzymes [BR:
limm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMORI2_07470 (polA)
DNA replication proteins [BR:
limm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LMORI2_07470 (polA)
DNA repair and recombination proteins [BR:
limm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LMORI2_07470 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMORI2_07470 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BDU57765
LinkDB
All DBs
Position
735934..738726
Genome browser
AA seq
930 aa
AA seq
DB search
MSESKTLLLVDGSSYLYRAFHAMPDLRAVPGDPTSAATGAIRGMINMMQALRKEVPTDYA
ACVFDAKGPTFRDEMYPEYKANRSPMPDDLRSQIEPIHQMVRLLGWTVLDVPGVEADDVI
ATLAVTAAKQGVNVVVSSGDKDLSQLVNEHITIMDTMNGKKRDVAGVTAEFGVPPHLMID
YQTLVGDTVDNVPGVAKVGPKTAAKWLAEYGSLDNLIQHADQIKGVAGENLRQALSWLPM
GRQLVTMKTDCDLSAYVAGLPALDALHLAEPNKHELKNFYETYGFKGLARAISEGTDAGV
GGAAPAAAKAKFEPTPGLFDELEPIVSAVTDKAYDCVLTWEAFDAWHAKLQAAELVAFDT
ETSSLSEMLAEVVGLSFSVKPGEACYIPLAHSYGDAPEQLPRDEVLAKLKPWFENPNAKK
LGQHIKYDRHVMANHGIEVQGYAHDTMLQSYVLEVHKPHGLASLAERHVGRKGLSYEDLC
GKGAHQIPFSQVDVARATEYSCEDSDMTLEVHQALWPRLQADEKLQFIYQLEMDSSEALY
RIERNGVLIDAPTLAAQSHALGQRILQLENEAYEIAGQPFNLASPKQLGEIFFDKLGLPV
IKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLALMAHPRTGRVHTH
YAQAVAVTGRLSSNDPNLQNIPIRTAEGRKVREAFVAPAGCVIASADYSQIELRIMAHIS
GDEALVKAFHEGLDVHRATAAEVFGVSVDAVSTEQRRYAKVINFGLIYGMSAFGLAKALG
IDNGAAKNYITRYFERFAGVKRYMDDTREQAKAQGFVQTVFGRRLYLPEINSPNGPRRAG
AERAAINAPMQGTAADLIKMSMVAVQKAIDDQQRQTKVIMQVHDELVFEVPESEVEWVRT
EVPRLMAEVAQLKVPLLAEVGVGLNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatccaaaaccttgctgctggtcgacggctccagctacctctatcgcgccttt
catgccatgcccgatttgcgagccgttcctggcgacccaacgagcgcagccacaggtgct
attcgcggcatgatcaacatgatgcaagccttgcgcaaagaggtgcccaccgattacgcc
gcttgcgtgtttgacgccaaaggcccgacctttcgcgacgagatgtaccccgagtacaaa
gccaaccgctcacctatgcccgatgatttgcgctcgcaaatcgaacccattcaccaaatg
gtgcgcttgctcggctggaccgtgctcgatgtgcctggtgtagaggccgacgacgtgatt
gccaccttggccgtcaccgcagccaagcaaggcgtgaacgtggtggtgtcgagtggcgac
aaagacttgagccaactggtgaacgagcacatcaccatcatggacaccatgaatggcaag
aagcgcgacgtggctggcgtgaccgccgagtttggcgtgcctccgcatttgatgatcgac
taccaaaccttggtgggcgacaccgtggacaacgtgcccggcgtggccaaggtaggcccc
aagaccgcggccaagtggctggccgaatatggctcgctcgacaacctcattcaacacgct
gaccaaatcaaaggcgtggcgggcgagaacctgcgccaagcactgagttggctacctatg
ggtcgtcagctggtgaccatgaaaaccgattgcgacttgtcggcctacgtggcgggcttg
cccgcgctcgacgcgctgcatttagccgagcccaacaagcatgagctgaaaaacttttac
gagacctatggcttcaaaggcttggcacgcgctatcagcgagggcacagatgcaggtgtc
ggtggtgcagcccccgctgctgcgaaagccaagtttgaacccacgcccggtttgtttgac
gagctcgagcccatcgtgtctgctgtgaccgataaggcttacgactgcgtgctcacgtgg
gaagcctttgacgcttggcacgccaagctgcaagccgctgagctggtggcgtttgacacc
gaaacctcgtcgctcagcgaaatgttggccgaggtggtgggcctgagcttttcggtcaag
ccgggcgaggcttgctacatcccgctcgcgcacagctatggcgatgcgcccgagcaactg
ccgcgcgacgaagtgctggcaaaactcaagccgtggtttgaaaaccccaacgccaaaaaa
ctgggccaacacatcaagtacgaccgccacgtcatggccaaccacggcattgaggtgcag
ggctatgcgcacgacaccatgctgcaaagctatgtgctcgaagtgcacaagccacacggc
ctggccagcttggccgagcgccatgtgggccgcaagggcttgagctacgaagacctatgt
ggcaaaggcgcacaccaaattccgttctcgcaagtcgacgtggcgcgtgccaccgagtac
tcgtgcgaagactccgacatgacgctggaagtgcaccaagccctttggccgcgcttgcaa
gccgacgagaaattgcaattcatctatcagctagagatggacagcagcgaagcgctgtac
cgcatcgagcgcaacggcgtgttgattgacgcgcccacactcgccgcacaaagccatgcg
ctgggccagcgcattttgcagctcgaaaacgaggcgtacgagattgcaggccagccgttt
aatttggcgtcgcccaaacagttgggcgaaatcttctttgacaaactcggcttgcccgtc
atcaaaaaaaccgccaccggcgcacgcagcaccgacgaagaggtgttggagaagttggcc
gaagactacccactgcccgccaaaattttggagcaccgcagtcttagcaaactcaaaggc
acctacaccgacaaactagctcttatggcccacccccgcactggccgcgtgcacacgcac
tacgcgcaagccgtggcggtgacaggccgcttgtccagcaacgaccctaacttgcagaac
attcccattcgcactgccgaaggtcgcaaagtgcgcgaagcctttgtagcccccgcaggc
tgcgtgatagccagtgccgactacagccagatcgagctgcgcatcatggcgcacatcagt
ggcgacgaggcgttggtgaaggcctttcacgaagggcttgacgtgcaccgcgccaccgct
gctgaagtgtttggcgtgagcgtggacgccgtgagcaccgagcaacgccgctacgccaag
gtcatcaactttggcctcatctacggcatgagcgcgtttggtttggccaaggcgctgggc
atcgataacggtgctgccaaaaactacatcacccgctactttgaacgcttcgcgggcgtc
aagcgctacatggacgacacacgcgaacaagccaaagcccaaggctttgtgcaaaccgtg
tttggccgccgcttgtacttgcccgaaatcaacagccccaacggcccacgccgcgcaggc
gcagagcgcgctgccatcaacgcgcccatgcaaggcacggcagccgacctcatcaagatg
agcatggtcgccgtgcaaaaagccattgacgatcaacaacgccaaaccaaagtcatcatg
caagtgcacgatgaactggtgtttgaagtgcccgagtcagaagtggaatgggtccgcacc
gaagtgccacgcctgatggctgaagtggcgcagctgaaagtgccgttgttagctgaggtg
ggagtggggttgaactgggatgaggcgcattga
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