KEGG   Limnohabitans sp. MORI2: LMORI2_08880
Entry
LMORI2_08880      CDS       T11141                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
limm  Limnohabitans sp. MORI2
Pathway
limm00740  Riboflavin metabolism
limm01100  Metabolic pathways
limm01110  Biosynthesis of secondary metabolites
limm01240  Biosynthesis of cofactors
limm02024  Quorum sensing
Module
limm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:limm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LMORI2_08880 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMORI2_08880 (ribD)
Enzymes [BR:limm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LMORI2_08880 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LMORI2_08880 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDU57906
LinkDB
Position
complement(875202..876305)
AA seq 367 aa
MSFSAQDTAFMQQALGLAHDALYLTSPNPRVGCVIVGTHGEVLGSGHTQRAGEAHAEVMA
LRDAQAKGHDVKGTTAYVTLEPCSHQGRTGPCCDALAAAGMARVVVALQDPNPLVAGQGT
ARLRTAGVQVDVGLLSDEAHEMNIGFFKRMTHGTPWVRMKLAASLDGQTALENGVSQWIT
SEPARTDGHAWRARACAVLTGIGTVLEDDPQLDVRAVPTPRQPALVVMDSQLETPLTAML
FTPQRPVLIYCAVDNAERRQALEAKGAQVICLPNPSGKVDLAAMLKDLGQKQINEVHVEA
GHKLNGSLLREGLVDELLTYLAPKLMGQGRGMTNLGPFTTLDDAKALSFHEVTQIGPDLR
ILARLSR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgagtttctccgcgcaagacaccgctttcatgcaacaagccttgggcttggcacatgac
gcgctttacctcacctcgcccaacccgcgtgtgggctgtgtgatcgtgggcacacacggt
gaagtgctgggcagcggccacacgcagcgcgcgggcgaggcccacgccgaggtcatggcc
ttacgcgatgcacaggccaagggccatgacgtgaaaggcactaccgcctacgtcacgcta
gagccctgcagccaccaaggccgcaccggcccatgctgcgatgcactcgccgccgcaggc
atggcccgcgtggtcgtggccttgcaagaccccaaccctctagtcgcgggccaaggtacc
gcccgcttgcgcaccgcaggcgtacaagtagacgtaggcttgttgtccgacgaagcgcac
gagatgaacattggctttttcaaacgcatgacgcacggcacgccgtgggtgcgcatgaaa
ctagccgcctcgttggatggccaaaccgctttggaaaacggcgtgagtcagtggatcact
tccgaacccgcacgcaccgacggccacgcctggcgcgcccgtgcgtgtgcggtgctcacg
ggcattggcactgtgctcgaagacgatccgcagctcgatgtccgtgccgtacccacgccg
cgccagcccgcactggtggtgatggacagccagctcgaaacgccactcacggctatgctc
ttcacaccgcaacgtcctgttttgatttactgcgcagtcgacaacgccgagcgccgccaa
gcactagaagccaaaggcgcacaggtcatttgcctacccaacccgtccggcaaggtcgat
ctagccgccatgctcaaagaccttggccaaaagcaaatcaacgaagtgcatgtagaagcg
ggccacaaactcaacggttcgctcttgcgcgaaggcttggtggacgaactgctcacctac
cttgcccccaaactgatgggccaaggccgtggcatgacaaatttagggcctttcacgact
ttggacgatgcaaaagcgctctcgtttcatgaagtgacacaaatcggcccagatttaagg
atattggctcgcctaagccggtaa

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