Limnohabitans sp. MORI2: LMORI2_10050
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Entry
LMORI2_10050 CDS
T11141
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
limm Limnohabitans sp. MORI2
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limm03400
]
LMORI2_10050
Enzymes [BR:
limm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMORI2_10050
DNA repair and recombination proteins [BR:
limm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMORI2_10050
Prokaryotic type
LMORI2_10050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDU58023
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Position
complement(1003834..1005441)
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AA seq
535 aa
AA seq
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MSYELVWFKRDLRWQDHAALAQAAQHGPVRCIYVVEPELWLQPDAALQHFEFVRESLQAL
DNALRIQGGCLEVHTGELPDVLNRIWQEAPFRRLHAHQETGNGFTYARDLKVGAWCKAHQ
VGWHEYPQFGVVRVLKNRNLWQAAWEQHMTAPLQDVGALQFWQPSPNAYKHQPHPHVGEH
SRTAWCSPSLIQAPSHLQHNPPLRQRGGRPLALDTLHSFLHARSLGYRGGISSPLSAPDA
CSRLSAYLAWGCISMREVVQQTRAHIAQLPPQASRHRAGLTAFISRLYWHCHFIQKLESE
PDIEWRNMHRGYDGLREHDFNEVHFEALKAARTGWPMVDACVTMLRETGWLNFRMRAMLV
SVAAYPLWLHWRPVGEWLATQFLDYEPGIHWSQLQMQSGTTGINTTRVYNPIKQAQDHDP
YGRFVRQWLPAMRQVPDTWLFEPWLMPDTMQAHLGVFVGSDMDSSLPEPVVDLAQATREA
KQRLHSRRQTDEVKAAKKAVVDKHASRKNWGTNKRSRRTATNRGQDTQTQLGFDF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagctggtttggttcaagcgagacctgcgctggcaagaccatgcagccttg
gcccaagctgcgcagcacgggcctgtgcgctgcatctatgtggtcgaacccgagctgtgg
ttgcagcccgatgcagctttgcagcattttgagtttgtgcgcgaatcgttgcaggcgcta
gacaatgcgttgcgcatacaaggtggctgccttgaagtacacacaggcgagctgcctgat
gtactcaaccgcatttggcaagaagccccgtttcgccgtctgcatgcccaccaagaaacc
ggcaatggctttacctacgcacgcgacctgaaagtgggtgcatggtgcaaggcacaccag
gttgggtggcatgagtacccgcagtttggtgtggtgcgcgtgctgaaaaaccgcaacctc
tggcaagccgcttgggagcagcacatgacagcacctttgcaagatgtgggggctttgcag
ttttggcagccatcaccgaatgcatacaagcatcagccgcacccccatgtcggcgagcat
tcgcgcacagcatggtgttcgccctcgctcatacaagcgccttcgcacttgcagcacaac
ccaccgcttcgccagcgtggcggacgtcctctggcactagacaccctgcacagttttttg
cacgcacgcagcttgggctatcgcggcggcatttcttcgccgttgtctgcgccagatgct
tgctcgcggttgtcggcttatttggcatggggttgcatcagcatgcgtgaggtcgtgcag
caaacgcgggcacacattgctcagctgccgccgcaggccagtcgccaccgtgcaggcctg
acggcgttcatcagccgtttgtattggcactgccatttcatccaaaaactcgagagcgag
cctgacatcgagtggcgcaatatgcaccgcgggtacgacggtttgcgtgaacacgatttc
aacgaagtgcattttgaagcgctcaaagccgcacgcaccggctggcccatggtggatgcc
tgcgtgaccatgttgcgcgaaacgggttggttgaactttcgcatgcgtgccatgttggtg
tcggtggcggcgtatccgctgtggctgcattggcggcccgtgggcgaatggttggccacg
cagtttttggactacgagcccggcatccactggagccagttgcaaatgcaatcgggcaca
acgggcatcaacaccacacgcgtgtacaaccccatcaaacaagcgcaagaccacgaccca
tatggccgctttgtacggcaatggctacctgccatgcggcaagtgccagacacatggctg
tttgagccttggctcatgcccgacacgatgcaagcgcaccttggcgtgtttgtgggcagc
gacatggacagctcgttgcccgagcccgtagttgacttggcccaagccacacgcgaagcc
aaacaacggctgcacagccgccgtcaaaccgacgaagtgaaagcggccaaaaaagctgta
gttgacaaacacgcctcacgcaaaaactgggggacgaataaacgttcgcgccgcacagcg
acaaatcgcggccaagatacccagacacaactcggttttgatttttaa
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