Limnohabitans sp. MORI2: LMORI2_11600
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Entry
LMORI2_11600 CDS
T11141
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
limm Limnohabitans sp. MORI2
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limm03016
]
LMORI2_11600 (truB)
Enzymes [BR:
limm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMORI2_11600 (truB)
Transfer RNA biogenesis [BR:
limm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMORI2_11600 (truB)
Prokaryotic type
LMORI2_11600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDU58178
LinkDB
All DBs
Position
1165702..1166727
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AA seq
341 aa
AA seq
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MSAVGQSQGSAKPSNTRMPRVRVQRRPVHGVLLLDKPMGLSSNDALQKAKWLLRAEKAGH
TGTLDPLATGVLPLCFGAATKFSQLHLDADKTYETTVRLGVKTSTADAEGEVTSARPVTC
TVGQVVEVLDRFMGPITQVPPMYSALKKDGKALYEYARAGETVEREPRHVVIHDLELLDM
QLNGDAPFLRLRVVCSKGTYIRTLGEDIAEALGCGGHLSALRRVATGPFVAADCVTLEDL
TAMAEPAREARLMPVECLLSDHTAVTLDAENAGRFLSGVRRRGAWTDQDRVCVFGEKPRA
LLGSAHVKAGELIPGRLLSPLEIQQILERSSANQPSLAEQA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtggggcagtcacaaggaagcgcgaagccttccaacacacgtatgccgcgc
gttcgcgtgcaacgacgccctgtgcatggcgtgttgttattggacaagccgatgggtttg
tccagcaacgatgcgctgcaaaaagctaaatggttgttacgtgctgaaaaagctggccac
accggtacgcttgatccgttggctactggcgtgttgcctctgtgttttggcgctgccacc
aaattcagtcagctccatttggatgctgacaaaacctacgaaaccactgtgcgcttgggt
gtcaaaaccagcacggcggatgccgaaggtgaagtgacttcagcgcgtcctgtcacttgc
accgtgggtcaagtggtggaggtgctagaccgtttcatggggccgatcacgcaagtgccg
cccatgtacagtgccttgaaaaaggacggtaaagctttgtacgaatatgcgcgcgcgggt
gaaaccgttgagcgcgaaccacgtcatgtggtgattcacgatttagagctgctagacatg
cagctcaatggcgatgcgccgtttttgcgtttgcgcgtggtgtgcagcaaaggcacgtac
atccgtactttgggcgaagacattgccgaggctttggggtgtggtggtcatttgagcgcc
ttgcgccgtgtggcgacaggcccgtttgtggcggcggattgcgtgacgttggaagacctc
acggcgatggcagagcccgcgcgcgaagcgcgcttgatgcctgtcgagtgtttgttgtca
gaccacaccgctgtcacattggatgcggaaaatgcaggtcgctttttgagcggtgtgcgt
cgtcgtggcgcttggactgaccaagaccgcgtgtgtgtgtttggagaaaaaccacgtgct
ttgctgggcagcgcccacgtcaaagcgggggagttgattccggggcgattgttgagtccc
cttgaaattcaacaaattttggaaagatcgtctgccaaccagccctcgctggccgagcag
gcataa
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