Limnohabitans sp. MORI2: LMORI2_18730
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Entry
LMORI2_18730 CDS
T11141
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMORI2_18730 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limm03400
]
LMORI2_18730 (recC)
Enzymes [BR:
limm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMORI2_18730 (recC)
DNA repair and recombination proteins [BR:
limm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMORI2_18730 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BDU58891
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All DBs
Position
2015609..2019151
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AA seq
1180 aa
AA seq
DB search
MVLHSNQLEGLRELAVQFIRNHPLPVLAPEVLLVQSNGMKHWLELALAKDLGICAATQVE
LPSAKLWQIYRAVLGPSNVPAHMPLDKSPLVWRIMRLLPSLLAKPSFAPLKNYLGQAEAD
ASPMNRRAYQLAAQLADVLDGYQNYRADWLEDWANHKDTLRTQTGTATPLPAAQSWQPEL
WRDLLDDLAADAEVKAELQHSYSSRAKVHEAFMAKMATLPEGQRPAGVPHRIMVFGVTSL
PMQTVQALAALGRVCQVLMLVQNPCQHYWGHVVESRVPLAKLSKQRQAHKKDLPIPQDDG
SLSEADQYKLHTDTHPLLAAWGKHGRDYLHLLDGFDDVDQYKGQFNRVDVFVDPADTAAD
EGRKPTMLEHLQSSLLNLAPLPDHLTDVPADDTSVRFVQTHSAQREVEVLHDRLLAWLDA
DPTLKPADIMVMVPDMANFAPHIHAVFGRFASHELRHIPYTVADTTPRTEPLVQALDTLL
QLPQLRVTRVEWQSLFEVAAVRERFGLEEHDVAQLDTWLADAGVRWGLDAPHRKPWGIAP
DMADANQNSWLFGIERLLLGYATGASDDLATPWADTLPQAGVGGLDARVVDGLLQWLRHT
QIALIKLRQEHTPTEWVAVLQQLVALFFKPNDEADERLIERVMAPLETWLAECQLARLDS
PLPLVVVREHWMAQLQQPAMQRRFFGGGVQFATLMPMRSIPFKCVCLLGMNDGDYPRSQT
PRDFDLMSDAAHAGSTQSHWRAGDRSRREDDRYLFLEALLSARDKLYISWQGRRTTDHEI
KPPSVLVAQLMDYLNAVWTQRNDKGEPMPACVAPLQPLQAFSQAYFRQGTGVQTYAADWQ
QAQSNSNSKTPHTKQEAADQAPTELTLKQLNRLLKQPVDVFVRDRLRLHLDTPEAASAQE
EPFALDHLDSYTLTQSIVQAPDPEHALQVLRLSGELALAGFGQAQQDMLLQQRDELLERF
DEIAKNWPMDVPVQSSRFALGAHSLSAEWANGQQIWKSKADQSAWLQVEMRPGSVLEGKE
KAKHPRAQTLTTLWLNHLVACASGTPTTSVQIGLNGAVQLDALSPSDALAELQNLVTLYQ
EAWHKPLPVARKTACAFVMTQLTSQDTNARDLALQAAQVVFDGSRNLTGEYESSTTLQRV
FHSFADLQNELPDMAERMYGKMVKSARLLSAAKASEEADA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcatagcaaccagctagagggcctgcgcgagttggcggtgcagttcatccgc
aaccacccgctgcccgtgctcgcgcccgaggtgctgctggtgcaaagcaacggcatgaag
cattggctagaactggctttggccaaagacctaggcatttgcgcggccacgcaggtggag
ctgccgtctgccaagctgtggcagatttaccgcgccgtgctgggccccagcaatgtgccc
gcgcacatgccgctggacaagtcgccactggtgtggcgcatcatgcgcttgctccccagt
ttgttggccaagcccagctttgcgccactgaaaaactacctaggccaagccgaggctgac
gcgtcgcccatgaaccgccgcgcgtatcaactggccgcgcagctggccgacgtgctagac
ggctaccaaaactaccgcgccgattggctagaagactgggccaatcacaaagacacacta
cgcacgcaaacaggcacagccacacccctgcccgccgcacaaagctggcagccagagcta
tggcgcgatttgctagacgaccttgcggctgacgccgaggtgaaggctgagctgcaacac
agctacagctcacgcgccaaagtgcacgaggcgttcatggccaagatggccaccttgccc
gaaggccaacgccctgcgggtgtgccgcaccgcatcatggtgtttggcgtcacatcgctg
cccatgcaaaccgtgcaggcgctggccgctttgggccgcgtgtgccaagtgctcatgctg
gtgcaaaacccctgtcagcactactggggccatgtggtggaaagccgtgtgccattggct
aagttgagcaagcaacgccaagcccataaaaaagatttgccgattccgcaagacgatggc
tcgttgagcgaagccgatcaatacaagttgcacaccgacacgcaccccctgctggccgca
tggggcaaacatggccgcgactacttgcacttgctcgatggctttgacgacgtagaccaa
tacaaaggccagttcaaccgcgtggatgtgtttgtcgaccccgcagacacagccgccgac
gaaggccgcaagcccacgatgctggagcacttgcagtcgtccctgctcaaccttgcgcca
ctgcccgaccacttaaccgacgtgcccgcagacgacaccagcgtgcgctttgtgcaaacg
cactcggcccagcgcgaggtcgaggtactgcacgaccgcttgctggcgtggctcgatgcc
gaccccactttgaagcccgccgacatcatggtgatggtgcccgacatggccaactttgcg
ccgcacatccatgcggtgtttggccgttttgcgtcgcatgagttacgccacattccctac
accgtggccgacaccacgccgcgcaccgagccactggtgcaagccctcgacaccctgctg
caactgccccaactgcgcgtgacgcgcgtggagtggcaaagcctgtttgaagtggccgcc
gtgcgcgaacgctttggcctagaagaacacgacgtggcccagctcgacacctggctggcc
gacgccggcgtgcgctggggcctcgacgcgccgcaccgcaaaccgtggggcattgcgccc
gacatggccgacgccaaccaaaacagttggctgtttggcatcgagcgtttgctgctgggc
tacgccacgggcgcaagcgacgacctcgccacaccgtgggccgacaccctgccccaagca
ggcgtgggcgggctagacgcacgcgtggtcgatggcctgttgcagtggctgcgccacaca
caaatagcgctgatcaaactgcgccaagaacacacacctaccgaatgggtggcagtgctg
cagcagctcgtcgcgttgttctttaagccgaacgacgaagccgatgagcgattgatcgag
cgcgtgatggctccgctagaaacatggctggccgaatgccaactggcgcgcctcgacagc
ccactgccattggtggtggtgcgcgaacactggatggcccagctgcaacagcccgccatg
caacgccgcttctttggcggtggcgtgcagttcgccacgcttatgcccatgcgctccatc
cccttcaagtgcgtgtgcttgctgggcatgaacgatggcgactacccacgcagccaaacc
ccacgcgactttgacttgatgagcgacgccgcacatgcaggcagcacccaatcacattgg
cgcgcaggcgaccgatcgcgccgcgaggacgaccgctatttgtttttagaggcgttgctg
tcggcacgcgacaagctctacatcagctggcaaggccgccgcacgacggaccacgaaatc
aaaccaccgtcggtgttggtggcacaactgatggactacctcaatgcggtgtggacgcag
cgcaatgacaaaggcgaacccatgcccgcatgcgttgcaccactgcagccgctgcaagcg
ttttcgcaagcctactttcgccaaggcacgggtgtgcaaacctatgccgccgattggcaa
caagcgcaaagcaattcaaatagcaaaacaccgcacactaaacaagaagcggcagaccaa
gcccctacagagctaaccctcaagcagctcaaccgtttgctcaaacaacccgtggatgtg
tttgtgcgcgaccgtttgcgcttgcacctagacacacccgaagcagccagcgctcaagaa
gaaccctttgcgctcgaccacctcgacagctacaccctcacgcaaagcatcgtgcaagcg
cccgaccccgaacacgcgctgcaagtgctgcgcctgagcggcgagctggccttggctggt
tttggtcaagcgcagcaagacatgctgctgcaacaacgcgacgagttgctagagcgcttt
gacgagattgccaaaaactggcccatggatgtacccgtgcagtccagccgctttgcactg
ggcgcacacagcctgagcgccgaatgggcgaatgggcaacagatttggaaaagcaaggct
gatcaatccgcgtggctacaagtagagatgcgccccggctcggtgctggaaggcaaagaa
aaagccaagcacccacgtgcgcaaacactcaccacgctgtggctcaatcacctcgtggct
tgcgccagtggcacgcccaccaccagcgtgcaaattggcctcaacggtgcggtacagtta
gatgcgctgtctccgtctgacgccttggctgaattgcaaaatttggtcacgctctaccaa
gaggcatggcacaagccactgcctgtggcacgcaagacggcgtgtgcgtttgtaatgact
cagctcacaagccaagacacaaacgcaagagaccttgccctgcaagccgcacaagtggtg
tttgatggcagccgcaacctcaccggcgaatacgaaagcagcaccacgctgcaacgtgtg
ttccatagctttgccgatttgcaaaacgaattgccagacatggccgaacgcatgtacggc
aagatggtgaaaagcgccagactgctgagtgcagcgaaggcgtctgaggaggctgacgca
tga
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