Limnohabitans sp. MORI2: LMORI2_21230
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Entry
LMORI2_21230 CDS
T11141
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMORI2_21230 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
limm03019
]
LMORI2_21230 (rppH)
Messenger RNA biogenesis [BR:
limm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMORI2_21230 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
BDU59141
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Position
2271949..2272590
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AA seq
213 aa
AA seq
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MLDREGFRPNVGIILLNQKNQVFWGKRIRTHSWQFPQGGIDRGETPEQAMIRELHEEVGL
KPEHVRIVARTRDWLRYEVPDRFIRRDARGFYKGQKQIWFLLQMVAPDHHLNLRATDHPE
FDAWRWNDYWVPLDVVVEFKRGVYEMALTELSRFLPRQDNRSRYLRGGGHQHASQEHSNR
TKQFGAAMNIELPPGATFDPDPQAALRQPREGS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgagaagggttcagacccaacgtcggcatcatcttgctcaaccagaaaaat
caggttttttggggcaaacgcatccgcacccacagctggcagtttccacaaggcggcatc
gaccgcggcgaaacgcccgagcaagccatgattcgtgaattgcacgaagaagtggggctc
aagccagagcatgtgcgcatcgttgcccgtacccgtgattggttgcgctatgaggtgcca
gaccggttcatccgccgtgacgcgcgcgggttttacaaaggccaaaagcaaatttggttt
ttgctgcagatggtcgcgcctgaccatcatttgaatttacgtgccaccgatcaccccgag
ttcgacgcttggcgttggaacgactattgggtgccgctggatgtggtggtggagttcaag
cgtggtgtgtacgaaatggcgctcacagagttgtcgcgctttttaccccgccaagacaac
cgcagtcgctacttacgtggcggcgggcatcaacacgcgtcacaagaacacagcaaccgc
accaagcaatttggtgcagccatgaacatagagctccccccaggcgccacgtttgaccca
gacccgcaagcggctttgcgccaaccgcgcgaaggctcataa
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