Limnohabitans sp. MORI2: LMORI2_21320
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Entry
LMORI2_21320 CDS
T11141
Symbol
hupB_2
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
limm Limnohabitans sp. MORI2
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limm03032
]
LMORI2_21320 (hupB_2)
03036 Chromosome and associated proteins [BR:
limm03036
]
LMORI2_21320 (hupB_2)
03400 DNA repair and recombination proteins [BR:
limm03400
]
LMORI2_21320 (hupB_2)
DNA replication proteins [BR:
limm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMORI2_21320 (hupB_2)
Chromosome and associated proteins [BR:
limm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LMORI2_21320 (hupB_2)
DNA repair and recombination proteins [BR:
limm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LMORI2_21320 (hupB_2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
MMS19_N
Motif
Other DBs
NCBI-ProteinID:
BDU59150
LinkDB
All DBs
Position
complement(2277888..2278160)
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AA seq
90 aa
AA seq
DB search
MNKTELIEHIASKSDISKAAATRALGSIIEAVKKTLKKGDTVTLVGFGTFSVSKRAARTG
RNPRTGAALKIKAAKVPRFKPGKGLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagacagaactgattgaacacatcgcgagcaaatctgacatttctaaagctgct
gccacccgtgcacttggctccatcattgaagctgtcaagaaaaccctcaaaaagggtgat
acggtgaccttggtgggtttcggcactttcagtgtcagcaagcgtgcagctcgtaccggt
cgcaaccctcgcactggcgctgctttgaaaattaaggctgctaaagtgcctcgtttcaag
cctggtaaaggcctgaaagatgctttgaattaa
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