Limnohabitans sp. MORI2: LMORI2_21940
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Entry
LMORI2_21940 CDS
T11141
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm00300
Lysine biosynthesis
limm00470
D-Amino acid metabolism
limm01100
Metabolic pathways
limm01110
Biosynthesis of secondary metabolites
limm01120
Microbial metabolism in diverse environments
limm01230
Biosynthesis of amino acids
Module
limm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMORI2_21940 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMORI2_21940 (lysA)
Enzymes [BR:
limm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LMORI2_21940 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDU59212
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Position
2335323..2336600
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AA seq
425 aa
AA seq
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MTHTTLAGAPFVATQHNDLYLEGVKLADLAHAHGTPLFVYSKAAMLSALAAYQRGFAGRN
ARICYAMKANSSLAVLQVFAQAGCGFDIVSGGELDRVIAAGGDASKVIFSGVGKTRAEMR
KALEVGIACFNVESEAELEVLSDVAHSMGKRAPVSIRVNPNVDAKTHPYISTGLKGNKFG
VAHERALATYQRAASLPGLQVTGIDCHIGSQITESTPYLDAMDRVLDLVDAIEAAGIAIH
HIDFGGGLGINYNGDTPPAADELWAQLLAKLDARGYGQRQLMIEPGRSLVGNAGVCLTEV
QYIKPGEQKNFCIVDAAMNDLPRPAMYEAFHQIVPVSARTGEAVTYDVVGPVCESGDWLG
RDRQLTVQAGDLLAVLSTGAYCMAMSSNYNTRGRAAEILVDGTKAHVIRRRETVEDQMAC
EALVR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaccacgcttgccggtgcgccttttgtggccacccaacacaacgatttgtat
ttggaaggcgtcaaactcgccgaccttgcacacgcccacggtacgcctttgtttgtgtat
tccaaagccgcgatgctcagcgcgctcgcagcgtaccaacgcggctttgcaggccgcaat
gcccgcatttgctacgccatgaaggccaactcatccctcgctgtgttgcaagtgtttgcg
caagcgggttgcggctttgacatcgtctctggcggtgagcttgaccgcgtcatcgcagcc
ggaggcgacgcctccaaagtgatcttttctggcgtaggcaaaacacgcgccgaaatgcgc
aaagccttggaagtgggcattgcctgcttcaatgtggagagcgaagccgagctcgaagtg
ttgagcgatgtggcccacagcatgggcaagcgtgcgcccgtgagcattcgcgtcaacccc
aacgtcgacgccaaaacccacccctacatttccaccggcctcaaaggcaacaagtttggc
gtggcgcatgaacgtgctttggccacgtaccaacgtgccgccagtctgcccggcttgcaa
gtgacgggcatcgattgccacatcggctcgcaaatcacagagagcacaccttacctcgac
gcgatggaccgcgtgttggatttggtcgatgccattgaagcagcaggcattgccattcac
cacatcgactttggcggcggcctaggcatcaactacaacggcgacacaccgcccgctgca
gatgaactgtgggcacaactgttggccaaactcgacgcgcgcggctacggccagcgccag
ctgatgattgaacccggtcgctcactcgtgggcaacgcgggtgtgtgcttgaccgaggtg
cagtacatcaaacctggcgagcaaaagaacttttgcatcgtcgatgctgcgatgaacgat
ttgcctcgccccgcaatgtacgaagccttccaccaaatcgtgccagtgtcggcgcgcaca
ggcgaagcggtgacgtatgacgtggtgggccccgtgtgtgagagcggcgactggctgggc
cgtgaccgtcagctcaccgtgcaagcaggtgacttgctggccgtgttgtcgaccggtgcg
tattgcatggcgatgtctagcaactacaacacgcgtggtcgtgcggctgagattttggtg
gatggcacaaaggcacatgtgattcgtcgtcgtgagacggtggaagatcagatggcttgt
gaagctttggttcgctga
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