KEGG   Limnohabitans sp. MORI2: LMORI2_22360
Entry
LMORI2_22360      CDS       T11141                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
limm  Limnohabitans sp. MORI2
Pathway
limm03030  DNA replication
limm03430  Mismatch repair
limm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:limm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMORI2_22360
   03430 Mismatch repair
    LMORI2_22360
   03440 Homologous recombination
    LMORI2_22360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:limm03032]
    LMORI2_22360
   03400 DNA repair and recombination proteins [BR:limm03400]
    LMORI2_22360
Enzymes [BR:limm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMORI2_22360
DNA replication proteins [BR:limm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LMORI2_22360
DNA repair and recombination proteins [BR:limm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LMORI2_22360
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: BDU59254
LinkDB
Position
complement(2381991..2382647)
AA seq 218 aa
MQSLISPKKWWRRLKRGWLIYHLGLPEFRFMFDRPPPNEWVSLDCETTGLNVGTDEIISI
GAVRIVGNKIMTSERFEVLVRPERGVSADSVRIHRLREQDVAQGLPADEAMKQLMRFIGS
RPLVGYFLEFDVAMLNKAIWPLLGQGLPQEKIEVSAMYYDYKFRQMLPYEQQTNPNIDLR
FATLMSDLDLPVREAHDALNDAVMAAMAFIKLRQLRGA
NT seq 657 nt   +upstreamnt  +downstreamnt
atgcagtcgctgatctctcctaaaaaatggtggcgcaggctcaagcgcgggtggttgatt
tatcacttgggcttgcccgagtttcgtttcatgtttgatcggccaccccccaatgaatgg
gtgtcgctcgattgcgaaaccacaggtctgaatgtcggcacggacgaaatcatctccatt
ggagcggtgcgcattgtgggcaacaagatcatgaccagcgaacgctttgaagtgcttgta
cgccctgagcgcggtgtgtcggcggacagcgtgcgcattcaccgcttgcgcgagcaagat
gtggcccaaggcttgccagcggatgaagcgatgaagcaactcatgcgtttcattggcagc
cgtcctttggtggggtactttttagagtttgatgtggccatgctcaacaaagccatttgg
ccgttgttggggcaaggattgccgcaagaaaaaatcgaagtctcggcgatgtactacgac
tataaatttcgccagatgctgccgtatgagcaacaaaccaaccccaacatcgatttacgt
tttgcgaccttgatgtcagatttggatttgccagtgcgtgaggcgcatgatgcgttgaat
gatgcggtgatggctgctatggccttcatcaagttgcgtcaattgcgcggcgcttga

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