Limnohabitans sp. MORI2: LMORI2_22360
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Entry
LMORI2_22360 CDS
T11141
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm03030
DNA replication
limm03430
Mismatch repair
limm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMORI2_22360
03430 Mismatch repair
LMORI2_22360
03440 Homologous recombination
LMORI2_22360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limm03032
]
LMORI2_22360
03400 DNA repair and recombination proteins [BR:
limm03400
]
LMORI2_22360
Enzymes [BR:
limm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMORI2_22360
DNA replication proteins [BR:
limm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMORI2_22360
DNA repair and recombination proteins [BR:
limm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMORI2_22360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDU59254
LinkDB
All DBs
Position
complement(2381991..2382647)
Genome browser
AA seq
218 aa
AA seq
DB search
MQSLISPKKWWRRLKRGWLIYHLGLPEFRFMFDRPPPNEWVSLDCETTGLNVGTDEIISI
GAVRIVGNKIMTSERFEVLVRPERGVSADSVRIHRLREQDVAQGLPADEAMKQLMRFIGS
RPLVGYFLEFDVAMLNKAIWPLLGQGLPQEKIEVSAMYYDYKFRQMLPYEQQTNPNIDLR
FATLMSDLDLPVREAHDALNDAVMAAMAFIKLRQLRGA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgctgatctctcctaaaaaatggtggcgcaggctcaagcgcgggtggttgatt
tatcacttgggcttgcccgagtttcgtttcatgtttgatcggccaccccccaatgaatgg
gtgtcgctcgattgcgaaaccacaggtctgaatgtcggcacggacgaaatcatctccatt
ggagcggtgcgcattgtgggcaacaagatcatgaccagcgaacgctttgaagtgcttgta
cgccctgagcgcggtgtgtcggcggacagcgtgcgcattcaccgcttgcgcgagcaagat
gtggcccaaggcttgccagcggatgaagcgatgaagcaactcatgcgtttcattggcagc
cgtcctttggtggggtactttttagagtttgatgtggccatgctcaacaaagccatttgg
ccgttgttggggcaaggattgccgcaagaaaaaatcgaagtctcggcgatgtactacgac
tataaatttcgccagatgctgccgtatgagcaacaaaccaaccccaacatcgatttacgt
tttgcgaccttgatgtcagatttggatttgccagtgcgtgaggcgcatgatgcgttgaat
gatgcggtgatggctgctatggccttcatcaagttgcgtcaattgcgcggcgcttga
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