Limnohabitans sp. MORI2: LMORI2_23110
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Entry
LMORI2_23110 CDS
T11141
Symbol
yncD
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
limm Limnohabitans sp. MORI2
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limm02000
]
LMORI2_23110 (yncD)
Transporters [BR:
limm02000
]
Other transporters
Pores ion channels [TC:
1
]
LMORI2_23110 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BDU59329
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Position
2478881..2481010
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AA seq
709 aa
AA seq
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MKKNKFSKPHHALKLASLFYLSVFPSALIYAQTTTSISEVVVQSGRLEQKQFDAPASIFT
VDADTIRNSGAQVNISDVLNRAPGVVALNRNNYAQDLQISIRGFGSRAAFGLRGIRLLTD
GIPASMPDGQGQASTVSMTSTDRMEVLTGPLAQLYGNASGGVIQTFTREAGDTPEAQVSL
YTGSFGMQRTDWQFSQRSGDVGLVADYSSFEIDGYRTNSGAQRKQLNSVITVDAKPDTRF
KFIINIFDMPYANDALGLTSAQLAADPAQAGTNAVARRTRKTVQQDQVGAVAEHRVSSDL
QLQARIYSGTRTNLQYQSTNLWTGLDRRYEGLGLQATGKANVFDGQRMNWVIGTEFDHAQ
EQRQGGAAANGEKSGALTRNELNEASNQDYFAQANWSLGERYTLTTGARQSNVTLKSRDD
MTSGVDGSGSVNYKATSPVLGLTWHAHNNLNVYINQGKGFETPTMAEAAYSRDANNNFVE
KFNPSLLASRSKHLEVGSKWLPSPSTRFDAAWFQIDTSNEIVAALSSNGKTAYANAAQTK
REGIELALRHQHTSNWRTQASATFMNATYEGGSASYSPPNGNSLPAIPKRQIFASLQWSE
KGFAPAGQKPALGLEAGLDLINRSRMWANDANSSTTADYALASGYSQLNARIRQRYQVGT
ARLDAFVGVDNLTNKDTVSSVIVNQSSKQYFEPGLPRSWVVGIQSQIPL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaattcagcaaacctcatcatgccctcaagttggcctctcttttctac
ctgagtgttttccctagcgctctcatctatgcgcaaacaacgacatccataagtgaagtg
gtcgtccaaagtggccggctcgaacaaaagcaatttgatgccccagcctcgatcttcacg
gtcgacgcagacaccattcgcaactctggtgctcaagtcaacatctccgatgtcctcaac
cgagccccaggcgttgtcgcactcaatcgcaacaactacgcacaagatttgcaaatctcg
attcgcggttttggatctcgtgctgcttttggtttgcgaggcattcgtctcctgaccgat
ggcattccagcatcgatgcccgatggacaaggtcaagcatcgaccgtgagcatgacatct
accgaccgcatggaagtgttaacagggccgctggcacaactctacggcaatgcatcgggt
ggtgtgattcaaacctttacacgcgaagcaggtgatacacccgaggcacaagtgagctta
tatacaggttcttttggcatgcagcgcacagattggcaattcagccaacgcagtggtgac
gtgggtctagtcgctgactacagctcatttgaaatcgatggatatcgcaccaacagtggc
gctcaacgcaaacagctcaacagcgtcatcacggttgatgcgaagccagatacgcgcttt
aaattcatcattaatattttcgatatgccctacgccaatgatgcgctgggcttgacatcg
gcacaactggctgccgatccggcacaagcaggcaccaatgccgtggcaaggagaacgcgc
aagacggtgcagcaagaccaagtaggagccgtggccgagcatcgggtaagcagcgatcta
caactgcaagctcgcatctatagcggcacgcgaacaaatttgcagtaccaatcgaccaac
ctgtggaccggtcttgacagacgctatgaaggcttaggtctacaagcgacaggtaaagca
aacgtatttgatggccaacgcatgaattgggtcatcggcacggagttcgatcatgcgcaa
gagcaacgccaaggaggcgccgctgccaatggtgaaaaaagcggtgcattgacgcgcaac
gaactcaatgaggcaagcaatcaagactactttgcgcaggcgaattggtctttgggtgag
cgatacaccttaaccactggcgctcgtcagagcaacgttaccttgaaaagccgcgacgac
atgacatcgggcgtcgacggctctggctcggtcaattacaaagccaccagcccagtgctc
ggtttgacttggcatgcacacaacaacctaaacgtttacatcaaccaaggcaaaggtttt
gaaacaccgaccatggcagaggcggcttattcacgcgatgccaacaacaacttcgttgaa
aaattcaacccaagcttgttagcctcaagaagtaaacacctggaagtcggaagcaaatgg
ctgccatcacccagcacacgatttgatgcggcgtggtttcagattgacacaagcaatgaa
attgttgcggccctatcgtccaatgggaaaacagcttatgcgaatgctgctcaaacaaaa
cgagaagggattgagttggcactgcgtcaccagcacacctctaactggcgcacgcaggcc
tcagccactttcatgaatgcaacttacgagggaggctcagccagctatagcccacccaat
ggcaacagcttgccagccatccccaaacgtcaaatcttcgcttcattgcagtggtcggaa
aaaggtttcgcaccagcgggacaaaaacctgcactgggtctagaggctggtttagatttg
atcaatcgttcacggatgtgggccaatgatgccaactcaagcacaacagctgactacgcc
ttggcatctggctacagccagttgaatgcacgtatccgtcagcgctaccaagtgggaact
gcccgtttggatgccttcgtcggtgtagacaacttgaccaacaaagacaccgtcagctcg
gtgatcgtcaatcaatcctcgaaacaatacttcgagcccggcctacctcgctcttgggtt
gtaggtattcaaagtcaaattccgctgtaa
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