Limnohabitans sp. MORI2: LMORI2_23600
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Entry
LMORI2_23600 CDS
T11141
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm00061
Fatty acid biosynthesis
limm00071
Fatty acid degradation
limm01100
Metabolic pathways
limm01212
Fatty acid metabolism
limm02024
Quorum sensing
limm04146
Peroxisome
Module
limm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LMORI2_23600 (fadD)
00071 Fatty acid degradation
LMORI2_23600 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LMORI2_23600 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMORI2_23600 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
limm01004
]
LMORI2_23600 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
limm04147
]
LMORI2_23600 (fadD)
Enzymes [BR:
limm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LMORI2_23600 (fadD)
Lipid biosynthesis proteins [BR:
limm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LMORI2_23600 (fadD)
Exosome [BR:
limm04147
]
Exosomal proteins
Exosomal proteins of breast milk
LMORI2_23600 (fadD)
Exosomal proteins of breast cancer cells
LMORI2_23600 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Phenol_monoox
DUF1576
Motif
Other DBs
NCBI-ProteinID:
BDU59378
LinkDB
All DBs
Position
complement(2526982..2528670)
Genome browser
AA seq
562 aa
AA seq
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MNSAQKPWLSAYPEGVPAEIDTKAYSSLVDLMQESFRQYGQRTAFSFLGKDLSYAELDRL
SQVFAAYLQSLGLVFGDRVAIMLPNVLQYPIAVAAVLRAGFVVVNINPLYTSRELEAQLK
DSDAKAIVVLENFGATLQECLARTHVRHVVLCAMGDRLGWLKGMLVNHVVRNVKKMVPNF
QLPTAVRFNEALALGERCALTLPEIHSDDLAVLQYTGGTTGVAKGAELLHRNLIANMLQA
SEWCGPALKRIPADEIPTFICALPLYHIFAFNVNLLSCMRMGGCSVLIPNPRDLPAVLKE
LTKHRFHIFPAVNTLFNALANHPDFNKVDWSHLQVSLGGGMAVQGPVAKLWLEKTGCPIC
EAYGLSETSPAASSNPVTSKVFNGAIGVPLPSTDMKIIDDEGNEVPVGTPGEIAIRGPQV
MAGYWQRPDETARVMTADGFFKSGDVGVMDERGFFRIVDRKKDMILVSGFNVYPNEVEEV
VAGMPGVMECAVIGIPDEHSGEAVKLVVVKKDPALTEEQVMEHCRHNLTGYKRPRVVEFR
TELPKTPVGKVLRRELRDKPAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgcacaaaaaccatggctcagcgcatacccagagggcgtgccagcagaaatt
gacaccaaggcttacagctcattggtggacttgatgcaggaaagttttcgtcaatacggg
caacgcacagcgttcagctttttgggcaaagatctgagctatgccgagctcgatcgcttg
agccaagtgtttgccgcgtatttgcaaagcttgggtttggtgtttggcgatcgtgtggcc
atcatgctgccgaatgtgttgcagtaccccattgctgtcgccgctgtgttgcgtgcaggt
ttcgtggtggtcaatatcaatccgctttacacctctcgcgaacttgaggcgcagctcaaa
gactctgacgccaaggccatcgttgtgcttgagaattttggcgccacgctgcaagagtgc
ttggcgcgaacccatgtcaggcatgtggtgctgtgtgccatgggcgatcggttggggtgg
ctcaaaggcatgttggtcaaccatgtggtgcgcaatgtcaagaaaatggtgcccaatttc
caattgccgacagccgtgaggttcaatgaggcgttggctttgggcgagcgatgtgcgttg
acgctgcctgaaattcatagcgacgatctggccgtgctgcagtacacaggcggaaccact
ggggtggccaaaggtgcagagctgttgcatcgcaacttgattgccaatatgttgcaagcg
tctgaatggtgcggccctgcgctcaaacggattcctgcagatgaaattcctacgttcatt
tgtgccttgccgctgtatcacatcttcgcgttcaacgtgaatttactgtcgtgcatgcgc
atgggtggatgctcggtgcttattcccaatccgcgcgatttgccagccgtgctcaaggag
ctgaccaagcaccgttttcatatcttcccagcggtcaataccttgttcaatgcgttggcc
aatcacccagatttcaacaaagtcgattggtctcacttgcaagtgtctttgggtggcggt
atggccgtgcaagggccggtggcaaagttgtggcttgagaaaacaggctgccctatctgc
gaagcttatggtttgtctgaaaccagtcctgccgctagcagcaaccccgtgacgagcaag
gtgttcaacggcgcaattggtgtgccgttgcccagcacagacatgaagatcattgacgac
gagggcaacgaagtgccggtgggcacgcccggtgaaatcgccattcgtggcccccaagta
atggctggttattggcagcgtcccgacgaaaccgcacgcgtgatgacggcggatggtttc
ttcaaatcaggcgatgtgggcgtgatggacgaacgcggcttcttccgcatcgtggatcgc
aagaaagacatgattttggttagcggcttcaacgtctaccccaacgaggtggaagaggtg
gtggctggtatgcctggcgtgatggagtgcgctgtcattggcattccagatgagcactcc
ggcgaagccgtcaagttggtggtggtcaaaaaagaccctgccctgacagaagaacaagtg
atggaacattgccgtcacaacctgaccggttacaagcgcccccgtgtggtggagttccgt
acagagttgcccaagactcccgtgggcaaagtgctgcgccgcgaattgcgcgacaaaccc
gcagcatga
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