Limnobacter profundi: HKT17_00195
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Entry
HKT17_00195 CDS
T06583
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
limn
Limnobacter profundi
Pathway
limn00630
Glyoxylate and dicarboxylate metabolism
limn00680
Methane metabolism
limn01100
Metabolic pathways
limn01120
Microbial metabolism in diverse environments
limn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HKT17_00195 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HKT17_00195 (fdhF)
Enzymes [BR:
limn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HKT17_00195 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_Nqo3
Fer4_7
Fer4_9
Fer4_21
Fer4
Fer4_10
Fer4_8
Fer4_17
Fer4_6
Fer4_2
Fer4_4
Fer4_16
DUF5363
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
QJR28235
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Position
complement(43724..46462)
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AA seq
912 aa
AA seq
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MNASQMIRLQLNGQTVEALPGETLLQVAQREGIDVPHLCYKAGLEAAGNCRACVVEVEDE
RTLAASCCRQAVAGMVVHTDSTKAIAAQKMVLELLLADMPNHANPKALKTDNELTHWCQQ
MDIEGSRFDARAAVPADLSHPAIAVNMDHCIQCTRCVRACRDVQVNDVIGLAFRGEHAAI
VFDQGDALAQSTCVACGECVQACPTGALSPAKAAAHQPADKTVDSVCPYCGVGCQLTYHV
KGNTILRVEGRKGPANEGRLCVKGRYGFDYVHHEQRLTQPLVRREGVTKNPVDLLDPEQV
NSAFRPATWDEALALIAGRFKQIKSTHGGHALAGFGSAKCSNEEAYLFQKLVRTGFGTNN
VDHCTRLCHASSVAALLEGIGSGAVSNPVMDVNQAEVIFVIGANPTVNHPVGATWIKNAV
KNGAKLIVADPRRSDLARHATHFLQFKADSDVALLNALLHVIIEEKLIDREFIEQRTEGF
DDLKANVSACTPEAMSSICGISPAELRAVARLYATSSASIILWGMGISQHTHGTDNARCL
ISLALITGQIGRPGTGLHPLRGQNNVQGASDAGLIPMMYPDYQQVCNPEAQQRFEALWNT
PLSNTPGLTVVETMQAILAGTVKGMYILGENPAMSDPDLNHARKALAALDFLVVQDIFLT
ETASLADVVLPASAFPEKTGTFTNTDRLVQLGQQAIHPPGQARQDLWIIQSIAQGLGLDW
QYNSLEEVFDEMRRAMHSIEGITWQRLQGEHALVYPCAHEGDIGQAVVFTEHFPTPNGKA
RLVPARYRKAAETPDSEFPFVLITGRQLEHWHTGSMTRRASVLDAIEPEPTALLHPEDLK
ALNIEAGNTIRLQSRRGEIQLFARADTGTPPGHVFVPFCYAEAAINKLTHAALDPDGKIP
EFKYCAIAVHKK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcgcaaatgatccgcttacagctcaacggccaaactgttgaagccctgcca
ggtgaaaccctgctgcaggttgcccagcgcgaaggcatcgacgtaccccacctttgctac
aaagccggccttgaagctgcgggcaactgccgcgcctgcgtggtcgaggtggaggacgaa
cgcaccttggccgcctcgtgttgcagacaggccgtggcaggcatggtggtgcacaccgac
tccaccaaggccattgccgcgcaaaaaatggtgctggaactgttgctggccgacatgccc
aaccacgcaaacccaaaagcgctgaaaaccgacaatgaattgacccactggtgccagcaa
atggacattgaaggcagccggtttgacgcgcgggcagccgtgcccgccgacctgtcgcac
cctgcaattgcagtgaacatggaccattgcattcagtgcacccgctgcgtgcgcgcctgc
cgggacgtgcaggtgaacgatgtcattggccttgcttttcgcggtgaacacgccgcaatt
gtgtttgatcaaggtgatgcgctggcccaatccacctgcgtggcctgcggcgaatgcgtg
caagcctgccccaccggtgcgctgagcccggccaaagccgcggcacaccagcccgcagat
aaaacagtggattccgtatgcccttattgcggtgtgggctgtcagcttacttaccacgtg
aagggcaataccattttgcgtgtcgaaggtcgcaagggacccgccaatgaaggccgcctg
tgcgtgaaaggccgctatggctttgactatgttcaccacgaacaacggctcacccaaccg
ctggttcgccgcgaaggagttaccaaaaacccggtcgatctgctggatccagaacaagtg
aatagcgcatttcgcccagccacttgggacgaagcactggccttgatcgccggccggttc
aagcaaattaaatccacgcatggcggccatgcactggctggttttggctctgccaaatgc
agcaacgaggaagcctatctgtttcaaaaactggttcgcaccggttttggtaccaacaat
gttgaccactgcacccgcttgtgtcacgcctcgtcagtggccgcattgctggagggtatt
ggatcgggagccgtgtccaacccggtgatggatgtaaaccaggccgaagtgatcttcgta
attggtgccaaccccacagtgaatcatcctgtgggcgccacctggattaaaaacgcggtt
aaaaacggcgccaaactgattgtggccgaccccaggcgttcagacctggcacggcacgcc
acccattttttacagttcaaggccgacagtgacgtggcactgctcaatgccttgttgcac
gtcatcatcgaagaaaagctgattgatcgggaattcatcgaacaacgtaccgaaggcttt
gatgacctgaaagcgaatgtcagcgcctgcacacccgaggccatgtcatccatctgtggc
atatcaccggctgaattgcgtgcagtggcccgcctgtatgccacatccagtgcatccatc
attttgtggggcatgggcatttcacagcacacccacggcaccgacaatgcacgctgcctt
atttcactggcactgatcaccgggcaaatcggtcgacctggcacgggccttcaccccttg
cgcggccaaaacaatgtgcagggcgcatcagacgccgggctgatccccatgatgtacccg
gactaccaacaggtgtgcaatcccgaagcacaacaacggttcgaggccctttggaacacg
ccactttccaacacccccgggctaaccgtggtcgagaccatgcaggcgattctcgccggt
actgtaaaaggcatgtacatactcggtgaaaacccggccatgtctgaccccgatttaaac
catgcccgaaaggcactggccgcactcgattttctagtggtgcaagacatcttcctgacc
gaaacggcaagccttgcagatgtcgttttacccgccagcgcttttcctgaaaaaaccggc
accttcaccaacaccgatcgcctggtgcaacttgggcaacaagccatccacccgccggga
caagcacggcaagacctgtggatcattcaaagtattgcacaaggactggggctggactgg
cagtacaacagtttggaagaagtgtttgatgaaatgcgccgcgccatgcacagcattgag
ggcattacctggcaacgcctgcaaggcgagcacgctttggtttacccctgcgctcatgaa
ggagacattggccaagccgtggtgtttaccgagcacttcccgacacccaatggaaaagct
cgcctggtgccagcccgataccgtaaggctgctgaaacacctgattccgagtttcccttt
gtattgatcaccggacgacaactggaacactggcacactggcagcatgacccgtcgcgcc
agcgttctggatgccattgaacccgaacccaccgcactgcttcatcccgaggatttaaaa
gccttgaacattgaggctggcaacaccattcggcttcaatcccgccgcggtgaaattcaa
ctgtttgcacgcgccgacacgggcacaccaccgggccatgtatttgtgcctttttgttat
gccgaggcagcaatcaacaaactaacccacgcagcactcgaccccgatggaaaaattccc
gagttcaagtactgcgctattgcggtgcacaaaaaatag
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