Limnobacter profundi: HKT17_00315
Help
Entry
HKT17_00315 CDS
T06583
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limn03009
]
HKT17_00315 (rsmB)
Enzymes [BR:
limn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HKT17_00315 (rsmB)
Ribosome biogenesis [BR:
limn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HKT17_00315 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
FtsJ
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
QJR28256
UniProt:
A0ABX6N1J8
LinkDB
All DBs
Position
73055..74422
Genome browser
AA seq
455 aa
AA seq
DB search
MKPVHSTPPKLTEASLAFALLKAAAVMTRVLREGRSLDQALAAETKGVKTPQALGAIQDL
AYFGMRNLGRGQVLTRLISGKALLNPEPLNELMALGFGLLWDDKNPKYPAHTVVDQMVYA
CTGSEQFARAKGLANACLRNFLRDSNTWRTKAFEDPLAQHNLPVWWIEKLKASHPQHWET
MVAQAQSHPPLVVRVNTRSISAPAYAEQLNAAGMEARVIGQQAVLLAKPVPVSALPGFDL
GQVSVQDSAAQLASQLLNPQNGQRILDACAAPGGKTGHLLELADIELVALDSSPQRLGRV
EDNIRRIAPTLNGQWDLRLKVAQAELLDTWWDGVPFDGILADVPCTGSGVVRRHPDIPWL
RRPDDIAKLSQIQHKILNALWSTLKPGGTLLLVTCSIFPEEGPLLANAFLDNHSDALAQT
APGWVLPVAAANPDQGFDASPDGFFYAKFEKSLTS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccggttcacagtacgccacccaaactgacagaagccagtttggcgtttgccctg
ctcaaggccgcggcagtcatgacccgggttctgcgggaaggtcgctcgcttgaccaagcc
ttggccgctgaaaccaagggtgtgaaaaccccgcaggctttgggtgccattcaagacctg
gcttacttcggcatgcgcaacctgggccgtgggcaagtattaacccgcttgatcagcggc
aaagcgctgctaaaccccgagcccttgaatgagttgatggccttgggttttggtttgctg
tgggatgacaaaaacccgaagtacccggcgcacactgtggtggaccaaatggtgtatgcc
tgcacgggcagcgagcagtttgcacgcgccaagggcctggccaatgcctgtttgcgcaat
tttttgcgcgactcgaacacctggcgaaccaaggcttttgaagacccgctggcgcagcac
aacttgccagtttggtggattgaaaaactgaaagccagtcacccgcaacactgggaaacg
atggtggcacaggcgcaaagccatccgcctttggtggtccgtgtaaacacccgcagtatt
tcagcgcccgcctatgccgagcagttaaacgccgcaggcatggaagcccgtgtgatcggt
cagcaggccgtgttgctggccaagcctgtgcctgtatctgccctgcccggctttgatttg
ggccaggtgtcggtacaagacagtgctgcgcaattggcttcccagttgctgaacccgcag
aatggacaacgcattctggatgcctgtgctgcaccgggcggaaaaaccgggcacttgctt
gagttggccgatattgaactggttgccctagattccagcccgcagcgcctgggccgcgtc
gaagacaacattcgccgcattgcccccaccctgaatggtcaatgggatttgcgtttgaag
gtggcgcaggctgaattgctcgacacctggtgggacggcgtgccttttgacggtattttg
gccgatgtgccttgcacgggttcaggcgtggttcgtcgccaccccgacattccatggttg
cgcagaccggacgatattgccaagttgtcgcagattcaacacaaaatactgaatgccttg
tggtctaccctaaagccgggcggtacacttttgctggtgacctgttccatctttcctgaa
gaggggcccctgttggcaaacgcatttctcgacaatcattccgatgccctggcgcaaact
gcgcccggctgggtgttgccagttgcagcggccaaccctgaccaaggctttgatgcatct
cccgacgggttcttttacgccaagtttgaaaaatccctaacctcttga
DBGET
integrated database retrieval system
