Limnobacter profundi: HKT17_00685
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Entry
HKT17_00685 CDS
T06583
Name
(GenBank) efflux RND transporter permease subunit
KO
K07787
copper/silver efflux system protein
Organism
limn
Limnobacter profundi
Pathway
limn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HKT17_00685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_00685
Transporters [BR:
limn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HKT17_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Tmemb_9
Motif
Other DBs
NCBI-ProteinID:
QJR28321
UniProt:
A0ABX6N1S8
LinkDB
All DBs
Position
146744..149881
Genome browser
AA seq
1045 aa
AA seq
DB search
MIAFIIRWSIANRLLVLIATVMISAWGVVSVYKTPLDALPDLSDVQVIVRTSFPGQAPQI
VENQVTYPLTTTMLSVPGAKDVRGFSFFGDSFVYIIFEDGVDLYWARSRVLEYLNQAQSS
LPAGAKSALGPDATGVGWIYQYALQDTTGSLDVSQLRALQDWFLRYELKTVEDVAEVASV
GGFVKQYQVVLDPQKLAGYGITLDEVVMAINNANQEAGGSVIELGEAEYMVRATGYLENL
DDFRSVPLKSSATGIAVQLADVARIQIGPEMRRGIGELNGSGESVGGIVVMRSGKNALNT
IEAVKAKLESLKPGLPKGVEIVPVYDRSTLINNAIDNLTFKLLEEFIVVALVCFVFLLHF
RSAFVAIVSLPLGVLASFIVMEQQGVNANVMSLGGIAIAVGAMVDAALVMIENAHKHLEQ
WAHDNPGKALAGMERWRVIGDASIEVGPALFSSLLIITLSFIPVFTLEAQEGRLFSPLAF
TKTYAMAASAGLAITLIPVLMGYLIRGKIPNENSNPINRGLIAAYRPALDAVLKFPKTTV
AVAVLLLGISFYPLSQLGSEFMPPLDEGDLLYMPTALPGLSAGKAAELLQQTDRLIATLP
EVESVYGKAGRAESATDPAPMEMFETTIQFKPKSEWREGMTADMLVDELDKIVRVPGLTN
IWVPPIRNRIDMLATGIKSPVGVKVTGADLGTINQVAVNIEKAVKNVEGVSSAFAERLTG
GRYVDVDIDRDMAARYGMNISDIQSIISSAVGGMNIGETVEGLQRFPINVRYPRELRDSL
TRLRVLPIYTGSGQRIVLSDVAKISITDGPPMLRSENSRLAGYVYIDIRGRDLRSAVLDM
QRVVAEQVKLPAGYSISWSGQFEYLERATEKLKLVVPFTLLIIFVLLYMTFKQVDEALLI
MATLPFALIGGAWLLWLLEFNLSVAGAVGFIALAGVAAEFGVIMLLYLNQSWANRVKRGN
TEEDDLLDAIREGAVLRVRPKAMTVLTILAGLIPIMWGTGTGSEVMQRIAAPMVGGMISA
PLLSMFVVPAVFLLMRRKQTLKREK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattgccttcattattcgatggtcgattgctaaccgtttgctggtgttgatcgccacg
gtcatgatcagtgcctggggtgtggtgtcggtgtacaaaaccccgcttgatgcgctgccc
gatttatccgatgtgcaagtgattgtacgcaccagctttcctggacaggcccctcaaatt
gttgaaaatcaggtgacctacccgctcaccaccaccatgctttccgtgcctggtgcaaaa
gatgttcgaggattttcgtttttcggcgacagttttgtttacattatttttgaagatggt
gtggacttgtactgggcgcgttcgcgggtactggagtatttaaaccaggcgcaaagcagc
cttccagcgggtgccaaaagcgccttggggccagatgccacaggcgtgggctggatttac
caatacgctctgcaagacaccaccggcagcctggatgtgtcgcaactgcgggctttgcaa
gactggtttctgcgctatgaattgaaaaccgtggaggatgtggccgaggtggcttcggta
ggcggtttcgtgaagcagtaccaagtggtgctcgaccctcaaaagttggcgggctacggc
attacgctcgatgaagtggtcatggcaattaacaacgccaatcaggaagcgggtggctcg
gtgattgaactgggtgaagccgaatacatggtgcgcgccaccgggtacctggagaatctg
gatgattttcgttcggttccattaaaaagcagtgccacaggcattgcagtgcagctggca
gatgtagcccgcatccagatcggccctgaaatgcgccgtggcatcggcgaattaaatggc
agtggcgagtccgtgggcggcattgtggtgatgcgttcgggtaaaaatgccctgaacacc
attgaagcggtgaaggccaagctggaaagcctgaagcccggtttacccaagggggttgaa
attgttccggtgtacgaccgctctacgttgatcaacaacgcaatcgacaacctcactttc
aaactgcttgaagaatttatcgtcgtggctttggtgtgctttgtttttcttttgcatttt
cgttcggccttcgtggcgattgtttccctgcccttgggtgtgttggcctcattcattgtg
atggagcagcaaggtgtgaatgccaacgtgatgtcgctgggcggtattgcaattgccgtg
ggtgccatggtggacgccgcgctggtcatgattgaaaacgcccacaagcaccttgaacag
tgggcgcacgacaaccctggcaaggcgttggcaggcatggaacgttggcgcgtgattggt
gatgcctcgattgaagtggggcctgccctgttttcttccttgttgatcattacgcttagt
ttcatccctgttttcacgctagaggcacaggaggggcgtttgttttctcccttggctttc
acaaaaacctatgccatggcagcctcggctggcctggccattacgctgattccggtgttg
atggggtacttgattcggggaaaaattcccaatgaaaattcgaaccccatcaatcggggt
ttgattgcagcgtatcgccctgcactcgatgcggtattgaaattccccaaaaccaccgtg
gctgtggccgttctgctgctgggcatcagcttctatccgctaagccagttgggcagtgaa
ttcatgccaccgcttgatgaaggcgatttgctttacatgcccaccgcattgccgggtttg
tccgcaggcaaggctgctgagttgttgcaacaaacagatcgcttgatcgccacgttaccc
gaagtggaatcggtctacggcaaagcgggccgcgcggagtcagcaacagaccccgcacct
atggagatgtttgaaaccaccattcagttcaagcccaaaagtgaatggcgagagggcatg
acagccgatatgttggtggacgagctggacaaaattgtgcgcgtacctggtttaaccaac
atttgggtaccacctattcgcaaccgcatcgacatgttggccaccggcattaaaagcccg
gtcggtgtgaaggtgacaggcgccgacttgggtaccatcaaccaagtggccgtgaacatt
gaaaaggcagtaaaaaatgtagagggagtgagcagcgcattcgctgaacgcctcactggc
gggcgttatgtggatgtggatattgaccgcgacatggctgcgcgatatggcatgaacatt
tcggatattcagtcgattatttcaagcgcagtgggtggcatgaacattggtgaaactgtg
gaaggtttgcagcgttttcccatcaatgtgcgttacccgcgtgagttgcgtgactcgtta
acccgcctgcgtgtactgccaatttacaccggctccggccagcgaattgtgttgagtgat
gtggccaaaatcagcatcaccgatgggccacccatgttgcgcagtgaaaattcccgattg
gctgggtatgtgtacatcgatattcgcgggcgcgatttgcgttctgccgtgctggacatg
caacgtgtcgtagctgagcaagtaaagctgccggccggctattccatttcatggtcgggg
cagtttgaatacctggagcgtgccaccgagaaattaaaattggtggtgccgttcactttg
ctgattatatttgtgctgttgtacatgaccttcaagcaagtggatgaagccttgctgatc
atggccactctgccttttgcactgattggtggcgcatggctgctgtggcttcttgagttc
aatttgtcagtggcgggtgctgtgggctttattgcactggcgggtgtggcggcggaattc
ggcgtcatcatgctgctttatttgaatcaaagctgggccaaccgcgttaaacggggaaac
actgaagaggacgatttgctggatgcgatccgcgaaggcgctgtgctgcgggtgcgcccc
aaagccatgaccgtgctcaccattctggccggacttataccaattatgtggggtaccggt
acaggaagtgaggtcatgcagcgcattgccgcacccatggtaggcggtatgatcagcgca
cctttgttgtcgatgttcgtggtgccagcagtgttcctgctcatgcggcgtaaacaaact
ctgaaaagggaaaaataa
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