KEGG   Limnobacter profundi: HKT17_01210
Entry
HKT17_01210       CDS       T06583                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
limn  Limnobacter profundi
Pathway
limn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:limn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HKT17_01210 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:limn02044]
    HKT17_01210 (tssI)
Secretion system [BR:limn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HKT17_01210 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 BRCA2_TR2
Other DBs
NCBI-ProteinID: QJR28423
UniProt: A0ABX6N210
LinkDB
Position
264410..266467
AA seq 685 aa
MNRLISLSGSAPLDEVHFRSARLQESLSENSTGSVFLESDSALLNADDFLGKNCCLAYET
REKTKRYFDGVIVEMEQVSMSSAGRCAYRLELKSWTWLLGKNQEFRVYQNKTVPGIVSEV
IGRHGHSSVRFSDRTMGAKRVWEYVVQYGESDLNFIRRILEQEGVYFYFEHGEGQHTLVL
VDSSSTHQVFPGYANLAYDPASQSGRLTPEETITSMSLKKSIEPPRHAHTDYNFKTPSNS
LLVNSQGKAESYNSAYEVFEYPGEFENEGEGTHYSKLRHEESQARQQTFNASTSARGVAT
GHLLKTVCKDNPALSKTLLVIGTLITVHESEPEASGGAQSDFDCQFEAIESSQPFRPERK
SRKPQVKGPLPALVVGPEGREIHTDEFGRIKIQFYWDRYGKHNQDSSCWVRVASPVAGKG
WGFVAIPRIGQEVVVSFEDGDPDRPLVTGVAYNAEQTVPYPLPEHKTVSGWRSQSSEKGS
PSNFNELRFEDKIGSEYVWFQAEKDYLSLIKNNSNTEIRGHSHSLIHGNLIEEIKADVSR
TVLGQLSQQIDKALHLTVNDDVLAKVQGLLGLTNNGQIAISTTGQCSLKSQGSTDLDAAG
NLNLSTSAQGNLKAGSSLKLTAGSSLSLNVGGSSIVISASGIKFSGPAVSVNGSAMGGDA
SAASPSPPEAALAPDLVEPPIDPIP
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgaacagattgatcagcctgagcggttcagctcctctggacgaagttcatttcagatct
gcgcgcttgcaggaatcactttccgagaacagtacaggttctgtgtttctggaatccgat
tctgcgctgttgaatgcagacgattttctgggaaagaattgttgtctggcctatgaaacc
cgtgagaaaaccaagcgttattttgacggtgtaattgtggaaatggagcaggtttccatg
tccagcgcagggcgctgcgcctatcgcctggaattgaaatcatggacgtggttgctgggc
aagaaccaggagtttcgcgtttaccagaacaagaccgtaccgggcattgtttccgaagta
attggtcgccacggacattcctcagtgcggttttctgatcgcacaatgggcgccaagcgt
gtttgggaatatgtggttcagtacggtgaaagtgacctgaattttattcgccgtatactt
gaacaggaaggcgtttatttttactttgaacatggtgagggccagcatacgctggtactc
gtagactccagcagtacacatcaagtttttcccggttatgccaatctggcctacgatcca
gcttcgcagagtggcaggctgacaccggaagaaacgatcaccagcatgtcattgaagaag
tccattgaaccgccaaggcatgcacacacggattacaacttcaaaacaccatcgaactcc
ttgctggtgaactctcagggcaaggcagaaagttacaactcggcctacgaggtgttcgag
tatcctggtgagtttgaaaatgaaggtgagggtactcactacagcaagctgcgtcacgaa
gagtctcaggcgcgccagcaaacgttcaatgcaagcacttcggcaaggggagttgcaaca
ggccatttgttgaaaacggtttgcaaggacaaccccgcgttgtccaaaactttgctcgtg
attggtaccctgatcaccgttcacgagtcagagccagaagccagtggcggtgcgcaatct
gattttgattgtcagtttgaagccattgagtccagccagcctttcagacccgaacggaaa
tccagaaaaccccaggtcaaaggacccttgcccgccttggttgttggcccggaggggcga
gaaatacacaccgatgaatttggtcgaatcaagattcagttttactgggatcgctacggc
aaacacaatcaggacagttcttgctgggtgcgtgtagcttctcctgttgctggcaagggc
tggggttttgtggccattccgcgtattggccaggaagtggtggtgtcattcgaagatggc
gatcccgaccggcccttggttaccggggttgcctacaatgctgagcaaacagttccctat
ccattgcctgaacacaaaacagtgtctggctggcgttctcaatccagcgaaaaaggctca
ccctccaatttcaacgaacttcgtttcgaagacaaaattggcagcgagtatgtgtggttt
caggccgagaaagattatttaagcctgatcaagaacaacagcaatacagaaattcgcggg
cattcccacagcttgattcacggcaacctgattgaagaaatcaaggccgatgtgtcgcgc
acagtgcttggtcaactcagtcagcagatcgacaaagccttgcatttgacggtgaacgat
gatgtgttggccaaagttcaaggtttactcggtttgaccaacaacgggcaaattgcaatt
agtaccactggccagtgctcattgaaatcccagggcagcactgacctggatgcagcaggc
aatttgaacctgagtacctcggcccaaggcaacttgaaagcgggctcaagcctgaagctg
accgcgggctctagcttgtcgctgaacgtgggtggctcttcgattgttatttccgcatca
ggcatcaaattcagtggcccagcagtttcagtcaacggaagtgccatgggtggtgacgcc
tctgcagcttccccaagtccgcccgaagccgcactggcgcccgatttggtagagccaccc
atcgatccaattccctga

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