Limnobacter profundi: HKT17_02140
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Entry
HKT17_02140 CDS
T06583
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
limn
Limnobacter profundi
Pathway
limn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HKT17_02140 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limn01007
]
HKT17_02140 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_02140 (aspS)
03029 Mitochondrial biogenesis [BR:
limn03029
]
HKT17_02140 (aspS)
Enzymes [BR:
limn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HKT17_02140 (aspS)
Amino acid related enzymes [BR:
limn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HKT17_02140 (aspS)
Transfer RNA biogenesis [BR:
limn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HKT17_02140 (aspS)
Prokaryotic type
Other AARSs
HKT17_02140 (aspS)
Mitochondrial biogenesis [BR:
limn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HKT17_02140 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QJR28590
LinkDB
All DBs
Position
457297..459102
Genome browser
AA seq
601 aa
AA seq
DB search
MKMRTDYCGNVSQAYLGQTIALCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDLADVFA
TAETLRNEFCVRVEGLVRARPSGTENSNLKSGAVEVLCKGLEILNASVTPPFQLDDENLS
ETTRLTHRVLDLRRPQMQKNLMLRYKVAMAIRNHLDAQGFVDIETPMLTKSTPEGARDYL
VPSRVHAGEFFALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQVDIETS
FLGEQEIRDLFEDMIRKVFKQTMDVELQNPFPVMPYSEAMARFGSDKPDLRVKMEFTELT
DIMKDVDFKVFSGPANMDNGRVVALRVPGGAEIPRSEIDNYTKFVGIYGAKGLAWIKVNE
LAKGRDGLQSPIVKNIHDTALNELLKRSGAADGDILFFGADKAKVVNDAMGALRLKIGHS
EFGQKAGLVQGKWEPLWVIDFPMFELDEEAGRWVACHHPFTSPKDGHEDYLTSDPGKCIA
KAYDMVLNGWELGGGSVRIHKEKVQSKVFRALNISEEEAAAKFGFLLDALQYGAPPHGGL
AFGLDRIVTMMSGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQTEPKNV
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcgtactgactattgtggcaatgtgtcacaggcctacttgggccaaaccatt
gccctgtgcggctgggtgcaacgtcgccgtgaccacggtggtgttatttttatcgacctt
cgcgaccgagaaggtttggtgcaggtggtgtgcgaccccgacctggccgatgtatttgct
accgccgaaaccttgcgcaatgaattttgtgtgcgtgtggaaggcctggtgcgtgcccgc
ccatcgggtactgaaaacagcaacctgaaaagcggtgctgtggaagtactgtgcaagggg
cttgaaattctgaatgcctcggtcacaccccctttccagctggacgatgaaaacctgtct
gaaaccacacgcctgactcaccgggttctggatttgcgccgtccgcaaatgcagaagaac
ctgatgctgcgctacaaagtggccatggctattcgcaaccacctggatgcacagggtttc
gtagacattgaaacgcccatgctgaccaagagcacgccggaaggcgcacgcgattacctc
gtgccctcccgtgtgcatgcgggcgagtttttcgccctgccgcagtcaccccagttgttc
aaacaaatgctgatggtggctggttatgatcgttattaccaaatcaccaagtgtttccgc
gatgaagacctgcgcgcagatcgccaacctgaattcacccaggtggacattgaaacctcg
ttccttggtgagcaggaaattcgtgacctgttcgaggacatgatccgcaaggtgttcaag
caaaccatggatgtggaattgcaaaaccccttccccgtgatgccctacagcgaggccatg
gcgcgttttggttcagacaagcccgacctgcgcgtgaagatggagttcactgaactcacc
gacatcatgaaggacgtggatttcaaggtgttctctggcccagccaacatggacaatggc
cgtgtagtggcgctgcgtgtgcctggtggtgctgaaattccacgttcggaaattgacaac
tacaccaagtttgtgggtatttacggcgccaaggggctggcctggatcaaggtgaacgag
ttagccaaggggcgagatggtttgcagtcgcccatcgtgaagaacattcacgacactgcc
ctgaatgaactgctcaagcgcagtggtgcggccgatggcgacattctgttcttcggtgct
gacaaggccaaggtggtgaatgacgccatgggtgctttgcgcctgaagatcggccacagc
gaatttggtcagaaagcaggtttggtgcaaggcaagtgggaaccactgtgggtgatcgac
ttcccgatgtttgaactggatgaagaagccggtcgctgggtggcttgccaccaccctttc
accagccccaaagacggccacgaagactacctgacctcagatcctggcaaatgtattgcc
aaggcttacgacatggtcttgaacggctgggagttgggcggtggttccgtgcgtattcac
aaagaaaaagtacaaagcaaagtgttccgtgccttgaacatttctgaagaagaagcggct
gccaagttcggtttcttgctggatgccctgcaatatggtgcgccaccccatggtggtttg
gcttttggcctggaccgcattgtgaccatgatgagtggtgcagagagcattcgcgacgta
atcgccttcccgaaaacacagcgtgcgcagtgcttgttgacccaggctccaagccctgta
gacgaaaagcagttgcgtgagttgcatattcgtttgcggcagaccgaacccaaaaacgtg
gcttga
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