Limnobacter profundi: HKT17_02475
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Entry
HKT17_02475 CDS
T06583
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
limn
Limnobacter profundi
Pathway
limn03060
Protein export
limn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HKT17_02475 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HKT17_02475 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
limn02044
]
HKT17_02475 (secD)
Secretion system [BR:
limn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HKT17_02475 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD-TM1
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
ACR_tran
ParBc
Motif
Other DBs
NCBI-ProteinID:
QJR28653
LinkDB
All DBs
Position
524389..526281
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AA seq
630 aa
AA seq
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MNRYPVWKYLMIAIVLVLGVLYTLPNFYGEAPAVQVSSGKSTLKLSPDLADRLSSQLEAQ
GVKPDGVFFEETLGGGTLKLRFNSSEEQLKARDFLQSQLNPDPADPDYIVALNLLSRSPD
WLTNINALPMYLGLDLRGGVHFLLQVDMDAALEKRKDALLASAKQTLREEDLRYASAPRT
PAGFNLTFRDAEARNKAQAALAKEYPDLQLATPENSTEFALVATLAPEIEQQAREYALRQ
NITTLHNRINELGVAEPVIQRQGADRIVVQLPGVQDTAKAKDILGRTATLEVRMVDDSPE
AQSALASGIVPFGLERYTERGGRDLLLKSEVILTGDNLTDAQAGFDNQTQEPAVHLTLDS
QGSRIFRNVTAESIGKRMAIVLIEKGKGEVVTAPVIRGEIGGGRVQISGSMNTVESADLA
LLLRAGSLAAPMDIIEERTIGPSLGADNIDKGINSTLYGFVVLGAFMIVYYLLFGVFSVF
ALAVNVMLLFALLSVLQATLTLPGIAAIALTLGMAIDANVLINERIREELRDGAQPQQAI
AAGYERAWATILDSNITTLIAGLALLIFGSGPVRGFAVVHCLGILTSIFSAVVVSRGVVN
LWYGRKKKLDSVSIGQIWRPSDDTAVAKKA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgataccctgtctggaagtacctgatgatcgccattgtgttggtgctgggtgtg
ttgtacaccctgcccaatttttatggtgaagcgcccgctgtgcaggtttcaagtggcaag
tccaccttgaaattatcacccgatctggctgaccgattgtccagtcagcttgaggcgcaa
ggcgtcaagcccgatggggtatttttcgaagaaacactgggcggcggaactctgaaatta
aggttcaactcgtctgaagagcaattaaaggcgagagactttcttcaaagccagcttaac
ccagacccggcagaccccgattacattgttgccctgaatttgttgtcgcgctcacctgac
tggctgaccaacatcaatgcattgcccatgtacctgggtctcgatttgcggggtggtgtg
catttcctgttgcaagtggacatggatgctgcacttgaaaaacgcaaggacgccttgctg
gccagcgccaagcaaaccttgcgcgaagaagatttgcggtatgccagcgcgccccgcacg
cccgctggttttaacctgaccttccgcgatgcagaagcccgcaacaaggcgcaggctgcc
ctggccaaggaatacccggacttgcagcttgccactcctgaaaacagcactgaatttgcg
cttgtagcgacgttggcgccagaaattgaacagcaggcgcgcgagtacgccttgcgccaa
aacatcactacattgcacaaccgaattaacgaattgggtgtggccgaacccgtgattcaa
cgccagggtgcggaccgcattgtggtgcagttgccgggtgtgcaagacacggcgaaggcc
aaagacattctgggccgcactgcgacgctggaagttcgcatggtggatgacagcccggag
gcccagtctgccctggccagcggtattgttccttttggcctggagcgttacaccgagcgt
ggtggccgcgatttgttgctgaaatcggaagtgattttgactggcgacaacctgaccgat
gcgcaagccggctttgacaatcaaacccaggaacctgcggtgcatttgacgctggacagc
cagggttcccgtattttccgtaacgtaactgctgaaagtattggcaagcgcatggcgatt
gtgctgatcgagaaaggcaagggcgaggttgtcaccgcgccggtcattcgcggtgaaatt
ggcggtggccgcgtgcaaatctcaggcagcatgaatacggttgagtcggctgacctggcc
ctgttgctgcgtgcgggttcgcttgctgcacccatggacatcattgaagagcgcaccatt
ggccctagcctgggtgctgacaacattgacaagggtattaactcaaccctgtatggcttt
gttgtgctgggcgcattcatgatcgtgtactacttgttgtttggtgtgttttcagtgttt
gcactggcggtcaacgtgatgttgttgtttgccttgttgtcggtgttgcaggccaccctg
acattgccaggtattgcagcgattgcgcttaccctgggtatggcgattgacgccaacgtg
ctgatcaacgagcgtattcgcgaagaacttcgtgacggcgcgcagccgcagcaagcaatt
gctgcaggttacgagcgagcatgggccaccattctggattcgaacattaccaccttgatt
gccggtttggctttgctgatttttggctcaggccctgtgcgtggttttgcagtggtgcat
tgtctgggtattttgacctcgattttcagtgcggttgtggtgtcccgtggtgtagtcaac
ctgtggtatggccgtaaaaagaaactggactctgtcagtatcgggcaaatttggcgtcca
agtgatgacactgctgtcgctaaaaaagcgtga
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