Limnobacter profundi: HKT17_02675
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Entry
HKT17_02675 CDS
T06583
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
limn03019
]
HKT17_02675 (rng)
03009 Ribosome biogenesis [BR:
limn03009
]
HKT17_02675 (rng)
Messenger RNA biogenesis [BR:
limn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HKT17_02675 (rng)
Ribosome biogenesis [BR:
limn03009
]
Prokaryotic type
rRNA processing factors
HKT17_02675 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QJR31038
UniProt:
A0ABX6NA44
LinkDB
All DBs
Position
complement(568107..569582)
Genome browser
AA seq
491 aa
AA seq
DB search
MNEQILVNVTPQETRVAIVQHGAVQELHIERTSTRGIVGNVYLGKVVRVLPGMQSAFVDI
GLERAAFLHVADLWEHRTYNHHQSKQNGNPPPAIEKMVFEGQTIIVQVSKDPLGTKGARL
TTQISLAGRMLVHLPQDPHIGVSQRIENEGEREELRAKLTRLLPENTGGFIIRTHAEEAT
DEELTADVNYLRTRWREMLELTRTKPAPSLIYEDLTMAQRVVRDLVSADTQAILIDSKET
LKNLLTFAETYAQETKDRLQLHQGERPLFELYNIEDELQKALGRRVELKSGGYVIIDQTE
ALTTIDVNTGGFIGARNFEETVFKTNLEAAHAIARQLRLRNLGGIIVIDFIDMSTEEHKK
AVLAELQKALDRDRARTSVTDFSALGLVEMTRKRTRESLAHLLCEPCPSCQGKGQVKTAQ
TVAYEIMREIVRESRQFNPKEFRILASPAVIDLFLEEEAQHLGMLEEFVGKPITLQVDNL
FVQEHYDIILT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atcaacgaacaaatactggtgaacgtgacaccgcaggaaacgcgcgtggccattgttcag
cacggcgctgtgcaagaacttcacattgaacgaacatcaacccgcggcattgtgggcaat
gtgtacctgggcaaagtggtgcgtgtgctgcccggcatgcaatctgcatttgtcgacatt
gggctggagcgtgcagcgtttctgcatgtggccgacctgtgggaacaccgcacttacaac
caccaccaatcgaagcagaatggaaacccaccgcctgccattgagaaaatggtgttcgag
gggcaaaccattatcgtgcaggtcagcaaagacccgctgggcaccaaaggcgcacggctc
actacacaaatcagcttggctggccgcatgctggtacacctgccgcaagacccacacatt
ggtgtttcacaacgcattgagaatgaaggcgagcgggaagagctgcgcgcaaaactaact
cgcttgctgcccgagaacaccggcggctttattattcgcacccacgccgaagaagccaca
gacgaggaattgaccgccgatgtaaattacctgcgtacccgctggcgcgagatgctggaa
ttgacccgcacgaagcccgcacccagcctgatttacgaagacctgaccatggcgcagcgt
gtggtgcgcgatctagttagtgccgacacccaagccattctaattgattcaaaagaaacc
ctgaaaaacctgctgacctttgctgaaacctatgcacaggaaaccaaagaccgccttcaa
ctgcatcaaggagagcggcctcttttcgagctgtacaacattgaagatgaattgcaaaag
gcgctgggccgtcgggttgaactgaaatcgggcggttatgtaatcattgaccaaactgaa
gcgctcaccaccatcgatgtgaacacgggcggttttattggtgcccgcaattttgaagaa
accgtgtttaaaacaaacctggaagcggcgcacgcgatagcgcgccaactgcgcttgcgc
aacctgggtggcatcatcgtgatcgacttcatcgacatgagcaccgaggaacacaaaaaa
gcggtgctggcggaacttcaaaaggcgttggaccgcgatcgcgcccgaaccagcgtcacc
gacttttctgcactgggcctggtggaaatgacccgcaagcgcacccgtgaaagcctggcc
catttgttgtgcgagccctgcccaagctgccagggcaaggggcaggttaaaactgcacaa
accgtggcctatgaaataatgcgggaaattgtgcgcgaaagccggcagttcaaccccaaa
gaatttcgcatactggccagcccagccgtgatcgacctgtttctggaagaagaggcccaa
cacttgggcatgctggaagagtttgtgggaaagccaattaccctgcaagtagacaacctg
tttgtgcaggaacactacgacattattttgacctga
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