Limnobacter profundi: HKT17_02740
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Entry
HKT17_02740 CDS
T06583
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
limn
Limnobacter profundi
Pathway
limn00730
Thiamine metabolism
limn01100
Metabolic pathways
limn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HKT17_02740 (thiC)
Enzymes [BR:
limn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HKT17_02740 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QJR28702
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All DBs
Position
581827..583743
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AA seq
638 aa
AA seq
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MSANPDFLAATAKVDEAAVKPLPNSRKVYVQGSRPDIQVPMREVSQDDTPTSFGGEKNPP
IYVYDCSGIYTDPTAKIDIRSGLPAIRNPWIEERNDTELLSGPSSEYGIERLNDPKLTEL
RFNLQRKPRKAKAGKNVTQMHYARQGIVTPEMEYVAIRENLRRQEYIESLKNAGGKIGAK
MVDLLTRQHPGQSFGASIPEQITPEFVRDEIARGRAIIPANINHPEIEPMIIGRNFLVKI
NANIGNSAVSSSIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPI
YQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLAYVPLTASRMTGIVSRGG
SIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFSLGDGLRPGSVWDANDEAQLSELRTL
GELTQIAWKHDVQVMIEGPGHVPMQLIKENMDIQLKECHEAPFYTLGPLTTDIAPGYDHI
TSGIGAAQIGWYGCAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAQIR
DNALSKARFEFRWEDQFNLGLDPDTAREFHDETLPKQSMKVAHFCSMCGPHFCSMKITQD
VREYAEKLGVSEKDALSKGMEEKSIEFIKKGSEIYHKT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaatcccgatttcctcgcagccaccgcgaaggtggatgaagctgcggtcaag
ccgcttcccaattcccgcaaggtctatgtgcagggctcacggcccgacattcaggtgccc
atgcgtgaagtttcacaagacgacacacccacttcattcggtggcgagaaaaacccgccg
atttacgtgtacgactgctccggcatttacacagaccccactgcaaaaatcgacattcgt
tcaggcttgcctgccattcgcaatccctggattgaagaacgcaatgacacagagttgctg
agtggccccagttctgaatacggcattgagcgcctgaatgaccccaagctgacagaactg
cgtttcaacttgcagcgcaaaccgcgcaaggcgaaggccggtaaaaacgtgacgcaaatg
cattacgctcgccagggtattgttacgccggaaatggagtatgtggccatccgcgagaac
ctgcgccgccaggaatacattgaaagcctgaagaacgcaggtggaaaaattggcgccaaa
atggttgatttgctgacccgtcagcacccaggccagtcttttggggcgtcaattcctgag
caaattacaccagagttcgtgcgcgatgaaattgcccgtggtcgggccatcattcccgcc
aacatcaatcaccctgaaattgaaccgatgatcattggtcgcaattttctggtgaaaatc
aatgccaacatcggtaactcggctgtgtcatcttcaatcggtgaagaagtcgagaaaatg
acctgggccattcgttggggtggcgacacggtaatggacttgtccactggcaagcatatt
catgaaacccgcgaatggattttgcgcaacagccctgttcccattggtacagtgcctatt
taccaggccctggaaaaggtcaatggcaaggctgaagacctgacctgggaaattttccgc
gacacgctgattgagcaagctgagcagggtgtggactacttcaccattcacgccggtgtg
cgtctggcttatgtgccgcttaccgcaagccgcatgacaggtattgtgtctcgtggtggt
tcaatcatggcgaagtggtgcctggcccaccacaaagaaagcttcttgtatgagcatttc
gaagacatttgcgaaatcatgaaggcttacgacgtcagcttctcgctgggtgatggcttg
cgccccggttcggtttgggatgccaatgatgaggcgcagctgagcgagcttcgcaccttg
ggcgaattgacccagattgcctggaagcacgatgtgcaggtaatgatcgagggtccaggc
catgtgcccatgcaattgatcaaagagaacatggacattcaattgaaagagtgccatgaa
gccccgttttacacccttggcccactgaccaccgacattgcccctggttacgaccacatc
accagtggaattggtgccgcacaaattggatggtacggctgtgccatgctttgttatgtg
accccaaaagaacacttgggcttaccgaacaaaaaagacgtgaaagacggcatcatcacc
tacaaaattgcagcccacgccgccgatttggccaaagggcaccctggcgctcaaattcga
gacaatgccttatccaaggcccgtttcgagttccggtgggaagatcagttcaatttgggg
cttgaccccgatacggcccgtgaattccacgacgaaaccctgcccaagcaaagcatgaaa
gtggctcacttctgctcaatgtgtggcccgcacttctgctcgatgaaaattacccaagat
gtgcgtgaatacgcagaaaaactgggtgtttctgaaaaagatgccttgagcaagggaatg
gaagaaaaatcgatcgagttcatcaagaaagggtctgagatttaccacaagacctga
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