Limnobacter profundi: HKT17_02835
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Entry
HKT17_02835 CDS
T06583
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_02835
Enzymes [BR:
limn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HKT17_02835
DNA repair and recombination proteins [BR:
limn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HKT17_02835
Prokaryotic type
HKT17_02835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJR28720
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All DBs
Position
complement(601564..603066)
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AA seq
500 aa
AA seq
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MPASLLENHPLSTQPKPGRYSKGLMWFRRDLRTHDNAALFYALKHCEQVHCVFVYDKTIL
DALPNKADRRVEFIWESCMALKTKLQGFGGDLHLIHDHAETAIPELATKLGAQAVFTNKD
YEPAAIHRDITVGKTLQGKGIELFRFKDQAIFEEDEVLTQAGKFFSVFTPFKNACLKKLD
AFHLTPYPSEARVGSLAKDSGLTAPSLDHMGFKRTNLLDMIKPGEEGALDAFEDFLNRMD
KYKVARDFPAIKGVSYLSVHNRFGTISIRRLAKAAYDRFKFEGSEGAMGWLNELIWRDFY
FQIIYHRPDAAEKAFKPEYDQIQWDADEKAQRLFKAWCEGKTGYPLVDAAQRQLNQTGFQ
HNRLRMVTASFLTKDLGLDWRWGEKYFAEHLNDFDLSANNGGWQWAASSGCDAQPYFRIF
NPYSQSEKFDADGKFIRKYCPELAKLSNKYIHNPAECPPFELQMAGVVLGETYPRPVVEH
DVARKKTLERYSVVKKAKED
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcacttctggaaaaccacccactgtccactcaacccaagccgggccggtac
agcaagggcttgatgtggtttcggcgcgacctgcgcacccacgacaacgcagccctgttt
tacgcgctcaagcactgcgaacaggtgcattgcgtgttcgtgtacgacaaaaccattctg
gatgccttgcccaacaaggcagaccgacgggtggagtttatttgggaaagctgcatggcc
ctgaaaacaaagctgcaaggctttggcggagatttgcacttgatccacgaccacgctgaa
acagcaattccggagttggcgacgaaactgggtgcacaagcggttttcaccaacaaagac
tatgaacccgcagccattcaccgcgacatcaccgtgggcaaaaccctgcagggcaaaggt
attgaattgtttcgcttcaaagaccaggccatctttgaagaagatgaagtgctgacccaa
gcaggcaagtttttcagcgtgttcacacccttcaagaatgcttgcctgaaaaaactggac
gcatttcacctgacgccctaccccagcgaagcacgagtgggatcactggccaaagattcc
ggtttgaccgcacccagtctggaccacatgggattcaaacgtacgaatttgctggacatg
atcaagcctggcgaggaaggtgcgctggatgcctttgaggactttctcaaccgcatggac
aaatacaaagtggcgcgcgacttcccggccatcaaaggcgtgagctacctgagtgtgcac
aaccgattcggcaccatttccattcgcaggctggccaaggcggcgtatgaccggtttaaa
ttcgagggcagcgaaggcgccatgggttggttgaatgaactgatctggcgcgatttttat
ttccagatcatttaccaccgccccgatgcggccgaaaaggcattcaagcctgaatatgat
caaattcaatgggacgccgacgaaaaagcacaacgcctgttcaaagcgtggtgcgaaggc
aaaacaggctacccactggtggacgccgcgcaacgtcaattgaatcaaaccggtttccag
cacaaccgcctgcgcatggtgaccgccagctttttgaccaaagacctagggctagactgg
cgctggggcgagaagtactttgctgagcacttgaacgactttgacctgtcagccaacaac
ggtggctggcaatgggcagccagcagcggttgcgatgcacaaccttatttccgcattttc
aacccgtacagccagtccgagaaattcgatgcggacggcaaatttattcgcaagtactgc
ccggagcttgccaaactgtccaacaaatacattcacaacccggccgagtgcccgcccttc
gagttgcaaatggcgggtgtggtactgggtgaaacctacccacggcccgtggttgaacac
gatgtggcccgaaagaaaacacttgaacgttattcggtcgtgaagaaagcaaaggaagat
tga
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