Limnobacter profundi: HKT17_03245
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Entry
HKT17_03245 CDS
T06583
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
limn
Limnobacter profundi
Pathway
limn03030
DNA replication
limn03430
Mismatch repair
limn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HKT17_03245 (dnaX)
03430 Mismatch repair
HKT17_03245 (dnaX)
03440 Homologous recombination
HKT17_03245 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limn03032
]
HKT17_03245 (dnaX)
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_03245 (dnaX)
Enzymes [BR:
limn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HKT17_03245 (dnaX)
DNA replication proteins [BR:
limn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HKT17_03245 (dnaX)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HKT17_03245 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_22
AAA_16
RuvB_N
AAA_30
AAA_5
AAA_19
AAA_18
AAA_14
nSTAND3
AAA_24
AAA_2
AAA_assoc_2
TsaE
PIF1
AAA_28
Glyco_tranf_2_5
Mg_chelatase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QJR28792
LinkDB
All DBs
Position
693453..695291
Genome browser
AA seq
612 aa
AA seq
DB search
MNQTVSQALARKWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARI
LARAVNCEQGISRTPCGKCQACVEISQGRFVDLLEVDAATNTRVDEMRALLENAMYAPTA
GRYKVYVIDEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQ
LPPDQLADHLAHILTEEKIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVGEETV
RTMLGAVDQQVVHQLLQALAVGDGKALLELSNALATASAPFGAILDELAAIAYRLSVAHF
AGELDADDPDQAALQHPQGAFGAEDLQLIYQIATHARAELHLAPEEHIGFSMALVRMLAF
KPGGQVAVGRTMPLAPAAIKATVPLLAAKPAAAKPVVAAVPSMPVEVSAEVPAAPVMEST
TPKGPSPALVEEFDESPPWDTADDLPVAQSKPVVPASASASEFKPQPAYTQSANGNLPSA
ANWPQVSQEVPAKGLTRQALVQAELVEASRDGEVLHIVLRTAIKAYTEPSMAARLESALG
QYYGSTVRLQMQFGEAQQTAHAVQSETRRQALEGAKQALQEDPFLKDIQNLMGATVVSGS
ERTLSNTGPADI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaccgtatctcaggctttggcacgaaaatggcgaccgcgagactttgattct
ctggtgggccaggcccatgtggttaaagccctctcccacgcgctcgacaatcaacgcctg
caccatgcctatttgttcaccggcacccgcggtgtaggcaaaaccaccattgcccgaatt
ctggcccgcgccgtgaactgcgagcagggtattagccgcacgccttgtggcaagtgccag
gcttgtgtcgaaatcagccagggccggtttgtcgatttgctggaagtggatgcagccacc
aacacgcgcgtggatgagatgcgtgccttgcttgagaacgccatgtacgcgcccaccgca
ggccgctacaaggtgtatgtcatcgacgaagtgcacatgctgtcgaccagtgcattcaac
gccatgctgaaaacgctggaagagccaccaggccatgtgctgtttattttggccaccacc
gatccgcaaaaaattccagccacggtgttgtcgcgttgcctgcagtttgccttgcgccaa
ttgccgcccgaccagcttgcagaccacctggcccacattctgacggaagagaaaattgcc
tttgagcccggtgcgctgcgcctcttggccaaggccgcacgtggcagtgtgcgtgatgca
ctttcactgactgaccaggccattgcctacagcgcaggccatgtgggtgaagaaaccgta
cgaaccatgctgggcgctgtggatcagcaagtagtgcatcagttgctgcaagccctggct
gttggcgatggcaaggctttgcttgaattgagcaatgcgctggccacagccagtgcgcca
tttggcgccattctcgacgaactggccgccattgcttaccggctttcggttgcgcacttt
gccggtgaacttgatgctgatgaccccgaccaggcggcgctacaacacccgcaaggtgct
tttggtgccgaagatttgcaactgatttatcaaattgccacccatgcccgtgctgaattg
catttggccccagaggaacacattgggttctccatggcgctggtgcgcatgttggccttc
aagccgggtgggcaagttgcggtgggccgtaccatgcccttggctccagcagccatcaaa
gcgaccgttcccctgttggcagccaaacccgctgcggctaaaccagtggtggctgctgtg
ccttcaatgcctgttgaggtttccgctgaggtccctgctgcgcctgtcatggagtcgacc
acacccaagggcccatcgcctgcgcttgtggaggaattcgacgaatcaccaccctgggac
accgccgatgatttgcctgtggcccaatcgaagcccgttgtgcctgcatctgcatcagcg
tcggaatttaaaccgcaaccggcttatacccaatcagccaatggcaatttgcccagtgcg
gccaactggccgcaggtgtctcaagaagtgcccgccaagggtttgacccgccaggcgctt
gtgcaggccgaactggttgaggccagtcgggatggcgaggtgctgcacattgttttgcgc
acagcaattaaagcctacaccgaacccagcatggcggcccgtcttgagagcgcactgggc
cagtactatggaagcactgtccgtttgcaaatgcagtttggtgaggcgcagcaaaccgcg
catgcggtgcaaagtgaaacccgcaggcaagcccttgaaggcgccaagcaagccttgcag
gaagacccgtttttaaaagacattcagaacttgatgggcgcaactgtggtctcaggttca
gaacgcacgctgagcaatacaggcccagccgatatttga
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