Limnobacter profundi: HKT17_03435
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Entry
HKT17_03435 CDS
T06583
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_03435
Enzymes [BR:
limn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HKT17_03435
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HKT17_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QJR28829
LinkDB
All DBs
Position
729059..730600
Genome browser
AA seq
513 aa
AA seq
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MSSKTKAVVVLGDQLDLNNPALLANPPKLADVLMVESPVESTVVWVHKVRIALFLSAMRH
FAQELRNAGYTVHYRSLGDTGQHSLATEVANLCKQHGYTSIDMAEPGEWRLEQDFLTLAK
SENIKLRMLEDSHYLCSRAEFAKWASGYKQMRMEYFYREMRKRTGVLMEGAEPAGGKWNF
DADNRSAFPKAGPGDITPPAFFEPDEITQTVFAEVEANFPGHPGTLKNFAWPVTRQQALK
ALDAFIENRFVNFGTYQDAMWTNTPFGWHSLVSSAINLHLLHPLEVIEKAEAAYRAGKVD
VASAEGFIRQILGWREFMRGVYWLDMPKMREDNHLQAKLDLPKWFWTGNTHMNCLKDSIG
QTLDYGYAHHIQRLMVIGNFALLAGLVPQQVEDWFLAVYVDAVEWVELPNVAGMALFANG
GRFTSKPYIASGAYIKRMSNYCAGCKYNPAEKTGDKACPFTTLYWGFLDQHEKMLSANPR
TGLMAKNIARLDEAQRQALRQKVADTFKNLEQL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaaaccaaagccgtggttgtgttgggcgatcaactcgacctgaataacccc
gcacttctggccaaccccccgaaattagccgatgtgctcatggtggagtcacctgtcgag
tccaccgtggtgtgggttcataaggttcgaattgctttgtttctcagtgcaatgcgccat
tttgctcaagagttgcgcaatgccggttacaccgtgcattaccgcagtttgggcgatacg
ggccaacacagcttggccacggaagtggcaaacctgtgcaaacagcacgggtacaccagc
atcgacatggccgagcccggcgaatggcgcttggagcaagactttctaacgctcgccaaa
tcagaaaacatcaagcttcgcatgctcgaggactcgcattatttgtgcagccgtgctgaa
ttcgcaaagtgggccagtggttacaaacagatgcgcatggagtatttttatcgcgaaatg
cgcaagcgcaccggtgtgttgatggagggtgctgaacctgctggcggtaaatggaatttt
gatgctgacaatcgcagtgcctttcccaaggctggtcctggagacattacgccccctgca
ttttttgaacccgatgaaataacacaaacggtgtttgccgaggttgaagcgaattttccc
ggtcacccgggcacattgaaaaatttcgcgtggccagttacgcgtcaacaggctttgaag
gcactcgatgccttcattgaaaaccgattcgtcaactttggcacctatcaggacgccatg
tggactaacacgccgttcggttggcattcattggtttcgagcgcaatcaatctgcatttg
ctccatccgctcgaggtgattgaaaaagccgaagccgcgtaccgcgcgggcaaggtggat
gtagccagtgcagaagggtttattcgccaaattctgggctggcgtgaattcatgcgcggg
gtgtattggctcgacatgccgaagatgcgcgaagacaatcatttgcaagccaaacttgat
ttgcccaaatggttttggaccggcaatacccacatgaactgtctgaaagactccatcggt
caaacgctggattatggttatgcgcatcacattcaacgcctcatggtgatcggcaatttc
gccctgctcgcaggcctcgttccacagcaggtagaagactggtttttggcggtgtatgtg
gatgcggtggaatgggttgagctgcccaatgtggccggcatggccttgtttgcaaatggc
gggcgctttaccagcaaaccctacattgcatcgggtgcttacatcaaacgcatgagcaac
tactgcgccggttgcaaatacaacccagctgagaaaactggtgacaaggcctgcccattc
accacgctgtattgggggtttcttgaccagcatgaaaaaatgctgtccgccaacccgcgc
actggcctcatggccaaaaacattgcccgactggatgaagcccaacgtcaggcccttcgg
caaaaagtggccgacaccttcaagaatcttgaacaactgtaa
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