Limnobacter profundi: HKT17_03630
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Entry
HKT17_03630 CDS
T06583
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
limn
Limnobacter profundi
Pathway
limn00220
Arginine biosynthesis
limn00240
Pyrimidine metabolism
limn00250
Alanine, aspartate and glutamate metabolism
limn01100
Metabolic pathways
limn01110
Biosynthesis of secondary metabolites
limn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HKT17_03630 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HKT17_03630 (carB)
00220 Arginine biosynthesis
HKT17_03630 (carB)
Enzymes [BR:
limn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HKT17_03630 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
GARS_A
ATP-grasp_5
CoA_binding_2
Secretin
Epimerase
Motif
Other DBs
NCBI-ProteinID:
QJR28868
UniProt:
A0ABX6N455
LinkDB
All DBs
Position
767768..770998
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AA seq
1076 aa
AA seq
DB search
MPKRNDLKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPEM
ADVTYIEPITWQVVERIIEKERPDAVLPTMGGQTALNCALDLAKHGVLAKYNVELIGAKE
EAIEKAEDRLKFKNAMTSIGLDSAKSGVAHSMEEALEVQASIAKQVGSNGFPVIIRPSFT
LGGTGGGIAYNAEEFETICRRGLEASPTNELLIEESLIGWKEYEMEVVRDSADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDREYQLMRNASIAILREIGVDTGGSNVQFSINPANG
RMIVIEMNPRVSRSSALASKATGFPIAKVAAKLSVGYTLDELKNDITGGLTPASFEPSID
YVVTKIPRFAFEKFPTADDRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNQKT
TDREVIERELGEPGPERIFYVGDAFAQGFSLEEVHQLTKIDRWFLIQIQDIVDTELELET
KTLADLSEPVLRLLKRKGFSDRRLAYLLDVSEAEIRKLRHQHNVRPVYKRVDTCAAEFKT
GTAYMYSTYEEECEAAPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAAMALREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAIEKPVGVIVQYGGQTPLKLAKSLEANGV
PIIGTSPESIDIAEDRERFQKLLTKLNLRQPPNRTARTEAEAIAHAQEIGYPLVVRPSYV
LGGRAMEIVHEQKDLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDALCDGQTVMIGGVM
EHIEQAGVHSGDSACCLPPYSLSADMVNELKRQSELMAKALNVIGLMNVQFAIQNDTVYV
LEVNPRASRTVPYVSKATGKQLAKIAARCMAGQTFAAQGVTEIPVPKYFSVKEAVFPFVK
FPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLAASVKLPEGGTAFISVKTEDKKHTVK
LAKGLVDLGFKIIATRGTAAAIAEGGIECTVVNKVLEGRPNIVDMLKNGEVQLVVNTVEE
RRSAINDSRYIRTTSLSSRVTIFTTMAGALASVEGMKHLGAMDVYSVQSLHAELSA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtaacgatctaaaaacaatcctgatcatcggcgccggccccattgtgatt
ggtcaggcctgcgaattcgactactcaggtgctcaagcctgtaaagcgcttcgcgaagaa
ggctataaagtggtgctggtcaacagcaaccctgccaccatcatgactgacccggaaatg
gccgatgttacttacatcgaacccatcacctggcaggttgttgagcgcattatcgagaaa
gaacgccccgatgccgtgttgcccacaatgggtggtcaaactgccttgaactgcgcgttg
gacttggccaagcacggcgtgctggccaaatacaatgtcgagttgattggcgcgaaagaa
gaagccattgaaaaagctgaagaccgcttgaagttcaagaacgccatgaccagcatcggc
ctggattctgcgaagagcggtgtggcccattccatggaagaagcgcttgaagtgcaggcc
agcatcgccaagcaggttggcagcaacggttttccggtcattattcgccccagttttact
ttgggcggaaccggtggtggcattgcctacaatgctgaagaattcgaaaccatttgccgt
cgtggtctggaagcatcccccacgaacgaactgttgatcgaagaaagcctgattggctgg
aaagaatacgaaatggaagtggtgcgcgacagtgcagacaactgcattatcgtgtgttcc
atcgaaaacctggaccccatgggcgtgcacaccggcgacagcattaccgtggcgcctgca
caaaccctgactgaccgcgaataccagttgatgcgcaatgcttccattgccattctgcgt
gaaattggcgtggataccggtggttctaacgttcagttctcgatcaacccggccaatgga
cgcatgatcgtgatcgaaatgaacccgcgtgtatcgcgttcatcggctttggcatccaaa
gccacgggcttcccgattgccaaagtggcagccaagctgtctgtgggttacacccttgat
gaattgaaaaacgacatcaccggcggcttgacccccgcgtcgttcgagccttccatcgac
tacgtggtcaccaagattccacgttttgcattcgaaaagttccccacagccgacgaccgc
ctgaccacacagatgaagagtgtgggcgaagtgatggccatgggccgcacctttcaggaa
agtttccagaaagccctgcgtggcctggaagttggcgtggatggtttgaatcagaaaaca
accgatcgcgaagtgatcgaacgtgaattgggtgaacccggccccgagcgaattttttat
gtgggcgatgcgtttgcccaaggctttagcctggaagaagtacaccagttgaccaaaatt
gatcgttggttcctgattcaaattcaagacatcgtggacacggaactagagctggaaacc
aaaacgctggcggatctttccgagccagtgttgcgcttactcaaacgcaagggcttctct
gatcgtcgcttggcttatttgctggatgtgtcggaagctgaaatccgcaagcttcgccac
cagcacaatgttcgccctgtgtacaagcgcgtagacacttgcgctgccgaattcaagacc
ggcaccgcttatatgtattccacctacgaagaggaatgcgaagccgcgcccactgacaag
aaaaagatcatggtgctgggcggtggccccaaccgaattggtcagggtattgagtttgat
tactgctgcgtgcatgccgccatggcactgcgcgaagacggctatgaaaccatcatggtc
aactgcaaccctgaaacggtttctaccgattacgacacttccgatcgcctgtacttcgag
ccattgacgcttgaagacgtgcttgaaattgttgccattgaaaagcccgtgggtgtgatt
gttcagtacggtggtcaaacgccattgaaattggcgaagtcactcgaagccaatggtgta
cccattatcggtaccagccctgaaagcatcgacatcgccgaagaccgcgagcgcttccag
aagctgctgaccaagctgaacctgcgccagccgcctaaccgcactgcacgcactgaagcc
gaggccattgcacatgcccaggaaattggttacccactggtggtgcgcccaagctacgtg
ctgggtggccgcgccatggaaattgtgcatgagcagaaagaccttgagcgctacatgcgc
gaggccgtgaaagtgagcaacgacagccctgtgctgctcgaccgcttcctgaacgatgcg
attgaggtggacgtagacgccttgtgcgatggccaaaccgtgatgatcggcggcgtgatg
gagcacattgagcaagcgggcgtgcacagtggcgactcagcctgttgcctgcccccctac
agcttgtctgctgatatggtcaatgaattgaagcgtcaatccgaactcatggccaaagcc
ttgaacgtgatcggtttgatgaacgtgcagttcgcgattcaaaacgacactgtgtatgtg
ctggaagtgaacccacgcgcctcgcgcactgtgccttatgtgtccaaggccactggcaag
cagttggccaagattgccgcgcgctgtatggccggccaaaccttcgcggcccagggcgtg
acggaaattcccgtaccgaaatatttctcggtaaaagaagccgtgtttccctttgtgaaa
ttccccggggttgacactattcttggccctgaaatgaagtccacgggcgaggtcatgggc
gttggccgcactttcggtgaggcgtttgtgaagtcgcagctggccgcgtcggtcaagttg
cctgaaggtggcaccgctttcatcagcgtgaaaaccgaagacaagaagcacaccgtgaaa
ctggccaaaggcctggttgatctgggcttcaagattattgcaacgcgaggcacggcagcg
gccattgctgaaggtggcattgaatgcaccgtggtgaacaaggtgcttgaaggccgcccg
aacattgtcgacatgctgaaaaacggagaagtgcagttggtggtgaacacggttgaagag
cgccgaagcgcgattaacgacagccgttacattagaaccacttcactgagttctcgtgtt
acgatcttcacaaccatggcaggtgcactggcttcagtcgagggcatgaaacacctcggc
gcaatggacgtttacagcgttcaaagcctgcatgcggaactctccgcttaa
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