Limnobacter profundi: HKT17_03865
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Entry
HKT17_03865 CDS
T06583
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
limn
Limnobacter profundi
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
AAA_lid_14
Sigma54_activ_2
V4R
HTH_8
Mg_chelatase
AAA_5
AAA_2
MCM
AAA
HTH_1
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QJR28906
UniProt:
A0ABX6N3E5
LinkDB
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Position
complement(816943..818607)
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AA seq
554 aa
AA seq
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MNTVTDLQSLLKFNLPSGHIWLDEQRMLLMHARALGALRKELFETLGLKRARGLLVRLGF
ASGIRDGQVALKHRRAGSSVEEAFMLGPQLHTLEGMVQVEKLSMEINLPTKHFYGEFVWK
NSWEDEAHVADYGQGDEPACWTMIGYASGYTSAFMGKLVLFREMECMSQGDSQCLIIGQS
AEAWNDPDYEEYFKAQAFAEELIEYHMGAEKLDTALVRRRSNDDLVGVSPAFMNAFELLQ
RAAQGSITVLLLGETGVGKEMFARWLHDNSPRAKGPFLAVNCAAIPHELIEAELFGVEKG
AYTGAHTPRAGRFERADHGTLFLDEVGDLPLSTQVKLLRVLQTGEFERLGSERVQKVNVR
IVAATNVELQQAIRENKFRIDLYYRLNTFPIKIPPLRERQADISPLINRFMTKYCASYNK
KLQGLTDKAMQEVMSYEWPGNIRELENLIERAVVLAPDGGYVEACHLFDDRIEPCKEKSQ
LNAQGELAPVETRPIDDLCNEILTKNVGLDTLERRLMQTALKQAKGNLSQAARVLGITRP
QLAYRLKKEGIPLE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtgaccgacctgcaatccctgttgaaattcaatctgccatccggccatatc
tggctggacgagcaacgcatgctattgatgcatgcccgcgcactgggcgcgctgcgcaag
gaattgtttgaaaccctgggcctaaaacgcgcgcgcggcctgctggttcggctcggcttt
gcctcgggtatccgcgatggtcaggtggccctgaagcacaggcgcgccggaagctctgtc
gaggaagccttcatgctgggaccacaattgcacacgctggagggcatggtgcaggttgaa
aagctcagcatggaaattaatctgccaaccaaacacttctacggtgaatttgtatggaag
aactcgtgggaagacgaagcgcatgtggccgactatggccaaggcgatgaacctgcctgc
tggaccatgattggttacgcgtcgggttacaccagcgccttcatgggcaagctggtgctg
tttcgagagatggaatgcatgagccagggcgattcacagtgcctgatcatcggccaaagt
gctgaagcctggaacgaccccgactacgaggagtatttcaaggcacaggcctttgccgaa
gaattgattgaataccacatgggtgcagagaagctggatacggccctggttcgccgacgc
agcaatgacgatttggtgggcgtatctcctgcctttatgaatgcattcgaattgctgcag
cgtgcagcacagggcagcatcaccgtattgctgctgggcgaaaccggcgttggcaaggaa
atgtttgcccgctggttacacgacaacagcccgcgcgccaaaggtccatttctggccgta
aactgcgcggccattccgcatgaactgattgaagcagagttgtttggtgtggaaaaaggc
gcttacacgggtgcacacaccccgcgcgcaggccgcttcgaacgtgccgaccacggcacc
ctgtttcttgatgaagtaggcgacctgcccttgtcaacccaggtgaaattactgcgcgtg
ctacaaactggtgaattcgaaaggttgggctctgaacgggtacaaaaggtaaatgtacga
attgtcgctgccaccaatgtggagctgcaacaagccatacgcgaaaacaaattccgtatt
gatttgtactaccgcctcaacaccttccccatcaaaattccccccctgcgggaacgccaa
gcggacatttcgccactgatcaaccgcttcatgaccaagtactgcgcaagctacaacaag
aagctgcaagggctgaccgacaaagccatgcaagaggtgatgagctatgaatggcccggc
aatattcgcgaattggaaaacctgattgagcgcgccgtggtgctggcacccgacggtggg
tatgtggaggcctgccacttgtttgacgaccgcatcgagccctgcaaagaaaaatcgcag
cttaatgcgcaaggcgagttggcgccagttgaaacgcgccctattgatgacttgtgcaat
gaaattttaaccaagaatgtggggctagacaccttggagcgccgtctgatgcaaaccgca
ttgaaacaggccaagggtaacctgtcgcaggctgcacgtgtgttgggcattacccgcccg
caactggcttaccgtttgaagaaagaaggcattccgctggaatga
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