Limnobacter profundi: HKT17_04480
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Entry
HKT17_04480 CDS
T06583
Name
(GenBank) efflux RND transporter permease subunit
Organism
limn
Limnobacter profundi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJR29015
LinkDB
All DBs
Position
complement(945750..948890)
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AA seq
1046 aa
AA seq
DB search
MNAASRRRVDRSGPLAWMTKNTVAANILMWVCLIGGVFGFMNMTKEVFPEFELDLVTVSV
AYPGASPEDVEQGIVLAIEEAISSIEGIVEVNSTANEGAASVVIEIDESEDAQAVYDKIK
QEVDRITTFPGDAEVPNVSLTARKRTVVTLVVHGDTDELSLRNLAEEARDGLLQNPGITQ
VDLTEIREQEIHVEVPEARLNAYGLTLQGIADNIRANVIEVSGGSISTQSGEILLRVSER
RDFANEFAALPIVSPVSGTPLKLGDIATVRDGFQDIDKYATFNGKPSIEISVSRIGEQTP
IGISEATQEALERIRPLMPEGIEISVVSDRSDTYKQRQELLAKNAVMGLILVMVLLTIFL
DWKLAFWISMGIPTAFLGAMLILPLFGVTFNMISMFAFIIALGIVVDDAIVAGENIYEYR
QQGMSMLDASIQGARDVAMPVTFSILTNIAAFAPLLFVPGFLGKIWGVIPLVVCTVFVVS
LMEAIFILPAHLAHSKEGTGKFHNWQQKFSKGFSQFIERRYTPIVQKCVEYRYLSMGVGI
ALMVLVISWPVSGRMGFELFPQVEADQSEVRAQLPLGSTNEQVNLVRDRIVESALKTVEA
TGGEQQSTGIYASVNENNITVRTYLTPPDVRPVPTAEFTDQWRLDVGNIPGVETIRFAAD
SGGPGSGPAFTVQLSHRNVDTLRQASEALARELANYPMVSEIDDGFQNGKEQFSFTLKEE
ARRLGLSSNDIGRQVRAAFFGSEALRQQRGRNEVKVLVMRPETERSAQTDVRDLLIRTPQ
GTLVPLHSLVEFDDTRAVANITRRDGRRTISVTANVNPRNQAQQVQNATVQDLMPKLMAD
YPGLSYSFAGRQQDFSEALGGLGKGFMVALLMIYVLLAIPFKSYLQPFIVMLAIPFGIFG
AIVGHLMMGYSISIVSMMGILALAGVVVNDSLVMVDHANEKVREGMTPYEAICTSGVRRF
RPIMLTTISTFGGLAPMIFETSRQAKFMIPMAISLGYGILFATAITLLLVPCLYLMIDDI
RRMLGTSPGLEPDEIDLTKLEETRTT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaagccgtcgccgggtagaccgttcaggcccattggcctggatgaccaag
aatacagtggccgccaacatcctgatgtgggtgtgcctgatcggtggcgtgttcggattc
atgaacatgaccaaagaagtattccccgaattcgagctggacctggtcaccgtgtctgtt
gcctaccctggggcaagccctgaagatgtagagcaaggcattgtgctggccattgaggaa
gccatttcaagcattgaaggcatcgttgaagtcaattccacagccaatgaaggcgcagcc
agtgtggtcattgaaatcgatgaatccgaagacgcgcaggctgtttacgacaaaatcaaa
caagaggtggaccgcattaccaccttccccggcgacgctgaagtgcccaatgtgtcactg
actgcgcgcaagcgaacagtagtcactctggtggtacacggcgacaccgatgaattatcg
ctgcgcaatctggctgaagaagcacgcgacggtttgctgcaaaaccccggtatcacgcag
gtagatctcaccgagattcgcgaacaggaaattcatgttgaagtgccagaagcccggcta
aacgcctatggcttaacgctgcagggcattgccgacaatattcgggccaatgtcattgaa
gtatccggcggaagtatttcaacccaaagcggcgaaatactgttgcgtgtttccgagcgg
cgtgatttcgccaatgagtttgcagcgctgccgatcgtgtcgccagtcagcggtaccccc
ttgaaactgggtgacattgccacggtgcgagatggctttcaggacatcgacaaatacgcc
accttcaacggcaaaccatccattgaaatttcagtgtcacggatcggtgaacaaactccc
atcggaatatctgaggccacacaggaagcgctggaacgcattcgccccttaatgcccgag
ggcatcgaaatttcggtggtcagcgatcgttccgacacctacaaacagcgacaggaattg
ctggctaaaaatgccgtgatgggtttgatactggtgatggtgttgctcaccattttcctg
gactggaagctggccttctggatcagcatgggaattcccaccgcgtttctcggtgccatg
ttgatactgcccctgttcggcgtcacctttaacatgatctcgatgttcgccttcattatt
gcgctgggcattgtggtggacgacgcgattgttgcgggcgaaaatatttacgaataccgg
caacaaggcatgagcatgttggacgcctctattcaaggcgcacgcgatgtggccatgcca
gtcaccttcagtatcctgaccaatattgcagcctttgcacccttgctgtttgtaccaggc
tttctgggaaaaatatggggtgtaattccgctggtggtgtgcacggtgtttgtggtgtcg
ctaatggaagcgatcttcattttgccagcccacttggcgcacagcaaagaaggcacaggc
aaatttcacaactggcaacaaaaattctccaaaggattcagccagtttattgaacgccgc
tataccccgattgttcaaaagtgtgtggaataccgttacctgtccatgggtgtaggcatt
gccctgatggtactggtgatcagctggccagtcagtggccgcatgggcttcgagctgttt
ccgcaagtggaggcagaccaatctgaagtgcgggcgcaattgccactgggcagcaccaat
gaacaagtgaacctggtgcgcgaccgcattgttgaaagcgccctgaaaaccgtagaagcc
acgggtggtgaacaacaaagcaccggcatttacgccagcgtgaatgaaaacaatattacg
gtacgaacgtacctgaccccgcccgatgtgcgcccagtacccaccgctgaatttaccgac
cagtggcggctggacgtgggcaatattcccggtgtggagaccattcggtttgcggccgac
tcgggcggccccggcagtggtcctgccttcacggtgcagttaagccaccgcaatgtagac
accctgcgccaggccagcgaggccctggcgcgtgaactggccaactaccccatggtgtcc
gaaattgacgatggatttcagaatggcaaggaacagttcagctttactttgaaagaggaa
gcgcgccgcttgggactgagttccaacgacattggtcgacaggttcgcgccgcatttttt
ggttctgaagcgctgcgccagcaacgtggccgcaacgaagtcaaggtgctggtgatgcgc
cctgaaacagaacgttcagctcaaaccgatgtgcgagacctcttgattcgcacaccacaa
ggaacactggtacccctgcattcactggtggaatttgacgatacgcgtgcggttgccaac
atcacgcgaagggatgggcggcgaaccatttcggtaaccgccaatgtgaacccgcgcaac
caggcacaacaggtgcaaaatgccaccgtgcaagatctcatgcccaagttgatggccgac
tacccgggcttgagctacagctttgccggccgccagcaagatttttcggaagccctgggt
ggtttgggcaaaggcttcatggtggccttgctaatgatctatgtacttttggccattcct
ttcaaaagctatctgcaacccttcattgtaatgcttgccattccattcggtattttcggc
gcaattgtaggccacttgatgatgggctatagcatcagcattgtgtccatgatgggcatt
cttgccttggcaggtgtggtggtcaacgactcgctggtgatggtagaccatgccaatgag
aaagtgcgtgagggcatgacgccctacgaggcgatttgtacttctggcgtgcggcgtttc
cggccaatcatgctgaccaccatttcaacattcggtggcttggcccccatgatttttgaa
acctcacgccaggcaaaattcatgatcccgatggccatttcactgggctacggtattttg
ttcgccacagccattacactgttgttggtaccctgtttgtacctgatgatcgacgatata
cgacgtatgttgggcacaagccctggccttgagccagatgaaattgatttgacgaaactg
gaagaaacccgcaccacatga
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