Limnobacter profundi: HKT17_04895
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Entry
HKT17_04895 CDS
T06583
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
limn
Limnobacter profundi
Pathway
limn02020
Two-component system
limn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HKT17_04895
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HKT17_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limn03021
]
HKT17_04895
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
limn02035
]
HKT17_04895
Transcription machinery [BR:
limn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HKT17_04895
Bacterial motility proteins [BR:
limn02035
]
Flagellar system
Flagellar assembly proteins
Stator
HKT17_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QJR29091
UniProt:
A0ABX6N4V1
LinkDB
All DBs
Position
1031868..1032584
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAQGTLDKSKQVDQYIPLVRRLAHHLIAKLPASVQIDDLIQAGLIGLMDAITRFEEGQ
GAQFETYASQRIRGSMLDELRSADWMPRGVRQAQRKIETATLKAEQKLGRSASEKEIAEV
LGVSLDEYQEMLFDSRGASLVFYDDYADDGDGEGYLDRQIGGDEEANPLEMLGDQRFREN
LIQAIEDLPEREKMLMGLYYEQELNFREIAAVLGVTESRVCQLHTQAVSRLKAKLREH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagcccagggcactttagacaaatcaaagcaggtggaccagtacatccctctg
gttcgcaggttggcgcatcacctcattgccaagttgcccgcatcggtgcaaatcgatgat
ctgattcaagccggcctgatcggcctgatggacgccattacccgctttgaagaagggcag
ggcgcccagtttgaaacctatgccagccagcgaattcgtggctccatgctcgatgaactg
cgctcagccgactggatgccgcgcggcgttcgccaggcacaacgaaaaattgaaaccgca
accctgaaagccgagcaaaaactggggcgctccgcctctgagaaagagattgctgaagtc
ttgggcgtgagtctggacgaataccaggaaatgttgtttgattcgcgcggtgcatcgctg
gtgttttacgacgactatgcagacgacggcgatggcgaaggttatctggatcgccagata
ggtggcgacgaagaggccaatccgcttgaaatgctgggtgatcaacgttttcgggaaaac
ctgatccaggccattgaagacctgcccgagcgtgaaaaaatgctcatgggactgtattat
gagcaagagttaaacttccgtgaaatcgccgctgtccttggcgtgactgaatcccgggtg
tgtcagttgcacacccaggcggtgagtcgcctcaaagccaagcttcgcgaacactaa
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