Limnobacter profundi: HKT17_05240
Help
Entry
HKT17_05240 CDS
T06583
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
limn
Limnobacter profundi
Pathway
limn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HKT17_05240 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limn01007
]
HKT17_05240 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_05240 (lysS)
Enzymes [BR:
limn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HKT17_05240 (lysS)
Amino acid related enzymes [BR:
limn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HKT17_05240 (lysS)
Transfer RNA biogenesis [BR:
limn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HKT17_05240 (lysS)
Prokaryotic type
Other AARSs
HKT17_05240 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QJR29154
LinkDB
All DBs
Position
1110812..1112344
Genome browser
AA seq
510 aa
AA seq
DB search
MNDKIQAAGDEQPVDENQIIAERRGKLAKLREKGQPFPNGFKPEHRAADLHAKYGLLDKE
TLDPQGIEVSVSGRMMLKRVMGKASFATVQDGTGRIQFYINNEGVGEDVHGEFKHWDLGD
IIAAKGKLFKTNKGELSVHCTEIHLLAKSLRPLPDKFHGLADQEIKYRQRYVDLIVSEQT
RDTFVARSRAMSSVRNFMANHGFLEVETPMLHPIPGGASAKPFITHHNALDMEMYLRIAP
ELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYWNYRDLMDFTEQVIQH
AATTATGSAKLTYQGRELDLSKPFARLTIVEAIQKYFPEYGTEDLQNIDCLKKALAKKGV
HVDKEPALKNAGIGALQLALFEETSESLLWEPTFIVDYPVEVSPLARASDANSQITERFE
LFITGREIANGFSELNDPEDQADRFKKQVEAKEAGDDEAMFFDADFIRALEYGMPPTGGC
GIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaaatacaagccgctggtgacgaacagccagttgacgagaatcagattatt
gccgagcgccgtggcaagctggccaaattgcgtgagaaaggccagcctttccccaacggc
ttcaaacctgagcaccgcgctgccgatttgcatgccaaatatggcttgctggacaaagaa
accctcgatccgcagggcattgaagtgtctgtttctggtcgcatgatgttaaagcgcgtg
atgggcaaggccagttttgcaaccgtgcaagatggcaccggccgcattcagttttacatc
aacaatgaaggcgttggcgaagacgttcacggtgaattcaagcactgggatttgggcgat
attattgcggccaaaggcaagctgtttaaaaccaacaagggcgagttgagcgtgcactgc
acggaaattcacttgctggcgaaaagcctgcgcccgctgcccgacaagtttcatggcttg
gccgatcaggaaatcaagtaccgccagcgttacgtggacttgatcgtttccgagcaaaca
cgtgacacctttgttgcgcgttcacgggccatgtcgtctgttcgcaatttcatggcaaac
cacggctttcttgaagtggaaacgcccatgttgcaccccattcctggcggtgcatcggcg
aagcctttcattacccaccacaatgcactggacatggaaatgtacttgcgcattgcgccc
gaactgtatttgaagcgcctgattgtgggcggtttcgagcgtgtgttcgagatcaatcgc
aatttccgcaacgagggtgtcagcccacgccacaacccggaattcacgatgatggaattc
tatgcggcgtactggaactaccgcgacttgatggacttcaccgagcaggtgattcaacac
gctgccaccactgcgaccggcagtgcgaagttgacttaccaaggccgcgaactggatttg
tccaagccttttgcacgcctgacaattgttgaagccattcaaaaatacttcccggaatat
ggcacggaagacttgcaaaacatcgactgtctgaaaaaggccttggccaagaaaggtgtg
catgtggacaaagagcctgcgctgaaaaacgcgggcatcggtgcattgcagttggccctg
ttcgaagaaacctcggaaagcctgttgtgggaacccactttcatcgtggactacccggtt
gaagtgtcacccttggcgcgcgcatccgatgcgaattcacaaatcactgaacgatttgaa
ttgttcatcactggccgtgaaattgccaatggtttttctgagttgaacgatccggaagac
caagccgaccggttcaaaaagcaggttgaggccaaagaagcgggcgatgatgaggccatg
ttctttgatgccgactttattcgtgcgcttgaatatggcatgccacccaccggcggttgc
ggcattggtatcgaccgtctgatgatgctgatcaccgatagccccaacattcgcgatgtg
attttgtttccccatttaaggcgcgaagactaa
DBGET
integrated database retrieval system
