Limnobacter profundi: HKT17_05525
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Entry
HKT17_05525 CDS
T06583
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
limn
Limnobacter profundi
Pathway
limn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HKT17_05525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_05525
Transporters [BR:
limn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HKT17_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QJR29206
LinkDB
All DBs
Position
1170402..1172684
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AA seq
760 aa
AA seq
DB search
MAVFGRITGSFAVAVALCLSLAACGKAPNNPYVETAEDKKLNTLYTAFTARPKHLDPAQS
YTSDEAEFTYQIYEPLFQYHYLKRPYQLEPLAAAAMPVPVYLDEAGNELPDDAPLNAVRT
SVYTIQLKPGVQYQPHPAFAKDAQGNFLYHQLGEEARKYSSPLQFEQQGTRELTAHDYVY
EIKRLASSRIVSPILGHMGDYVEGLGELSKTLQEHDKALKEKIQKETGSAFPPATADLPW
LDLREFDLPGAKALDDHTLEIRVNGKYPQFIYWLAMPFFAPIPWEADAFYSQKGFIENNL
VLDWWPVGTGAYMLTENDPNSRMVLSRNPNHRGEPYPSEGEPGDKAKGLLADAGKTMPFI
DRVVFTREKEGIPYWNKFLQGYYDTSGVSADTFDQAIRASADGDAALTPDMAEKGIRLET
SLSTSMFYLGFNWLDPVVGPGSSAEEARRAKLLRQAIAIAMDWEEFSQIFTNGRAVPAHG
PVPPGLFGYEEGEAGYNTQVYNLVDGKPVRKPVEDALALLKQAGYDNGIDPKTGQPLTLA
LDTTGGGPGDKARFDWYRKQFAKLNIQLDIRATDWNRFQEKIRKGNAQIFFLGWNADYPD
PENFLFLLYGPNSRAKTAGENASNYSNAQYDAMFERMKTMPNNEERAAIISQMTDLVQDD
VPWLFAFVPQQFGLIHEWYGNVKPNDLARNSIKYKTIDTAKRDQARKEWNQPEWWPIPVL
LLALALFIWPAWAAWKRREQAMGIREDLAATVANRTGGKR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttggcagttttcggtcgcattacaggcagtttcgcagtggcggtggctttgtgcctgtcg
ctcgctgcatgtggcaaggcgcccaacaatccttacgttgaaactgcggaagacaaaaag
ctcaacaccctttacaccgccttcacggcacgccccaagcatctggatccagcgcagtct
tacacctccgacgaagcggaattcacttaccaaatttacgagccgctgtttcagtaccac
tacctgaaacggccctatcagctagagcccttggctgctgcggccatgcctgtaccggtt
tacctggatgaggcgggcaacgaattgcccgatgacgcgccgcttaacgcggtgaggacc
agcgtttataccattcaattaaagcctggcgttcaatatcaaccgcacccggcttttgcg
aaagatgcccagggcaattttttgtaccaccagctcggcgaagaagcccgcaagtacagc
agccccttgcagtttgagcagcagggtacgcgcgagttaactgcgcacgattatgtgtac
gagatcaagcgccttgccagttcccgaatcgtgtctccaattctggggcacatgggcgat
tacgtggaaggcttgggggagttgtcaaaaaccctgcaagaacacgacaaagcgctgaaa
gagaaaatccagaaagaaaccggcagtgcctttccgcctgccacagctgacttgccctgg
cttgatctgcgtgaatttgatttgcctggtgccaaagcgctggacgaccacacactagaa
attcgcgtgaacggcaaatacccccagtttatttactggctggccatgcctttttttgca
cccattccctgggaagctgatgcgttctacagtcaaaaaggttttatagaaaacaacctg
gtgctggattggtggcctgtgggcacgggtgcttacatgttgactgaaaatgacccgaat
tcccgcatggtgttgtcgcgcaacccgaaccaccgcggtgagccgtatccatcagagggt
gagcccggcgacaaggccaaaggcctgttggccgatgccggcaaaacaatgccctttatc
gatcgtgtggtgttcacgcgcgagaaagagggcattccttactggaacaagtttctgcag
ggctattacgacacctctggggtcagtgcagacacctttgatcaggccattcgtgccagc
gccgatggcgatgcagctttaaccccggacatggcggaaaagggcattcgtctggaaaca
tcattgtccaccagcatgttttatctgggtttcaattggctggatcccgtggtggggccg
ggcagctccgccgaagaggcgcgccgtgccaaattgctgcgccaagccattgcaattgcc
atggactgggaggaattctcgcaaattttcaccaatggtcgagcagtgccagcccacggc
ccggtgccgcctggcttgtttggttacgaggaaggtgaggccggctacaacacgcaggtg
tacaacttggtggatggcaagccggtacgcaagccagttgaagacgccttggccttgttg
aaacaagcaggttatgacaatggaattgacccaaaaacagggcaacccttaaccctggcg
ctcgatacaacaggcggaggccccggtgacaaagcccgcttcgattggtaccgcaagcag
ttcgccaagctgaacattcaactggatattcgtgccaccgactggaaccgttttcaggaa
aaaatccgaaagggcaatgcgcaaattttcttcctgggctggaatgcagattaccccgat
ccggaaaactttttgttcctgctctacggccccaacagccgcgccaaaactgcgggggaa
aatgcctcgaactattccaatgcgcaatatgacgccatgttcgagcgcatgaaaaccatg
cccaacaatgaagagcgtgccgcgattatttcgcagatgacggaccttgttcaagacgat
gtgccctggttgtttgcctttgtgccccagcagtttgggctgatccacgagtggtatggc
aacgtaaagcccaacgacctggcccgcaacagcatcaaatacaaaaccatcgataccgcc
aaacgtgatcaggccagaaaggaatggaaccagcccgaatggtggcctattccggtgttg
ttgcttgcactggccctgttcatttggcccgcctgggccgcctggaagcgccgtgaacaa
gccatgggtattcgcgaagacttggctgcgactgtggcaaaccgcacagggggcaagcgc
tga
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