Limnobacter profundi: HKT17_05540
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Entry
HKT17_05540 CDS
T06583
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
limn
Limnobacter profundi
Pathway
limn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HKT17_05540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_05540
Transporters [BR:
limn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HKT17_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
NACHT
AAA_5
AAA_25
Mg_chelatase
AAA
TniB
nSTAND3
AAA_29
RsgA_GTPase
AAA_7
ATP-synt_ab
nSTAND1
DUF87
TsaE
AAA_13
DEAD
AAA_33
AAA_23
PRK
AAA_18
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
QJR29209
LinkDB
All DBs
Position
1175077..1176921
Genome browser
AA seq
614 aa
AA seq
DB search
MSLLNIHGLTTRLASEAGWVHALDDISLAIEKGQTFALVGESGCGKSMTALSIARLLPDS
GAIVAGQVRLNESSAGANSNSTDVLRISETAMRTLRGKRIAMIFQEPGTSLNPVMTVGDQ
LTEIICLHTGVNKAQALKEAEAWLGRVGIPEPKKRLQQYPFEMSGGQKQRVMIAMALSVK
PDLLIADEPTTALDVSIQAQVLDLLKTLQREQGMAMLLITHDLAIVKQMADTVGLMYAGQ
LVEKASTAEFFAAPRHPYAHALVKSLPSQAQRGQALYALEGRVPSLVNPKPGCRFAARCL
HAQENCSQSTPQLLAATQTHTVRCFYHADLSFTKPGAGGVNSVGGSFSGATSKVVLQTVS
LSVAYPEKGGLLRKHFKPVLNKLDITLLQGRTVALVGESGSGKTTAARALLGLLGSNAKV
DGDVLMDSRPLRQWAERGPEGWRSKIQFVFQDPFASLNPRHRIAEILEEPLLSLRPDLDA
TARKARVLKVIDQVSMPEEALARFPHEFSGGQRQRIAIARALVSEPRILICDEPTSALDV
SVQAQILNLLKRLQTETGVAMLFITHNLAVVQYLADEVVVLRHGDVVERGSAEQLFANPQ
HAYTRQLIDAAPVL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgctcaacatccatggacttaccacccgcttggccagtgaggctggttgggtg
catgcgctcgatgatatttcattggccattgaaaagggccaaacttttgccttggtgggt
gaatcgggttgtggcaagtccatgaccgcgctcagcattgcccgcctgctgccagacagt
ggcgcaattgttgccgggcaggtgaggttaaacgagagtagtgcaggtgcaaattcaaac
agcaccgatgtgttgcgcatcagcgaaacggccatgcgcaccctgcgtggcaaacgcatt
gccatgatttttcaggaaccgggcacaagcttgaacccggtgatgaccgtgggcgaccag
ttgaccgaaatcatttgtttgcacactggggtcaacaaggcacaagcattgaaagaggcc
gaagcgtggctgggccgcgtgggcattcccgagcccaaaaagcgattgcagcagtatccc
tttgaaatgtcgggcggccaaaaacagcgtgtcatgatcgccatggccttgagtgtcaag
cctgacctgctgattgccgatgaaccgaccacggcactggatgtgtccattcaggcgcaa
gtacttgatttattgaaaaccctgcagcgcgagcagggcatggccatgctgctgattacg
catgacctggcaattgtgaagcaaatggcagatacagtggggctgatgtacgctggccaa
ctggttgagaaagccagcaccgcagagttttttgctgcaccacgccacccttatgcgcat
gcactggtgaagtccttgcccagccaagcccagcgtgggcaagctttgtatgcgcttgaa
gggcgtgttccatcgttggtgaatcccaaacctggttgccggtttgcggcccgttgcctg
cacgcgcaagaaaattgcagccaaagcacaccacaattgcttgcagccacacaaacccat
accgtgcgttgtttttaccatgccgatttgtcgttcacaaagcctggcgcaggtggtgtg
aactcggtgggcggcagtttttcaggcgcaacttcaaaggtggtgttgcaaacggtgtct
ttgtcggtggcttatcccgaaaaaggtggtttgctgcgtaagcatttcaagccagtgctg
aacaagctcgacatcactttgttgcaaggccgcactgtggctttggtgggcgaatcgggt
tctggtaaaaccacagcggcccgcgccttgctgggtttgttgggcagcaatgcgaaagtg
gatggcgatgtgctgatggacagcaggccccttcgccaatgggcagagcgcggccctgag
ggctggcgttcaaaaattcagtttgtattccaagacccttttgcttcgctgaatcctcgc
catcgaattgctgaaattctggaagagccattgcttagtttgcgccccgatctggatgcg
actgctcgcaaggctcgtgtgctgaaagtgattgaccaagtcagcatgcccgaagaagcc
cttgctcgttttccgcatgaattttcgggtggtcagcgccagcgcattgcgattgcccgt
gcattggtttcagagcccagaattttgatttgcgatgaacccacttcagcgctggatgtg
tcagttcaggctcaaatattgaatttgctgaaacgcctgcaaactgaaaccggtgtggcc
atgctgtttattacccacaacctggcggtggttcagtacctggccgatgaagtggtggtg
ctaaggcatggcgatgtggtggagcgcggttcggctgaacagttgtttgccaacccacag
catgcttatacccgtcagttgattgatgcggcgccggtgctttaa
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