Limnobacter profundi: HKT17_05565
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Entry
HKT17_05565 CDS
T06583
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
limn
Limnobacter profundi
Pathway
limn03030
DNA replication
limn03430
Mismatch repair
limn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HKT17_05565 (dnaQ)
03430 Mismatch repair
HKT17_05565 (dnaQ)
03440 Homologous recombination
HKT17_05565 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limn03032
]
HKT17_05565 (dnaQ)
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_05565 (dnaQ)
Enzymes [BR:
limn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HKT17_05565 (dnaQ)
DNA replication proteins [BR:
limn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HKT17_05565 (dnaQ)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HKT17_05565 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QJR29213
UniProt:
A0ABX6N546
LinkDB
All DBs
Position
1180362..1181084
Genome browser
AA seq
240 aa
AA seq
DB search
MRYVVLDTETTGLEVRQGHRIIEIGCIEVNGRQVTDHHFHQYINPEREVDEGAFQVHGIS
DEMLADKPKFKQIAKDFLDFVQGSTLIIHNASFDIGFLDGELERLGLGKMADYVDGVIDS
LGMAREMFPGKRNNLDALCDRLGVNNAHRQLHGALLDSQILAEVYLAMTRGQDSLVIDLN
AHHEDDGVERIKLSALSLPEPEPTDEELVLHQAYLTDIEKAAKGPSVWSKISQATEEPAV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagatatgtagtactggatacagaaacaaccggcctggaagttaggcagggtcaccgg
attatcgaaattgggtgtatcgaagtgaatggtcggcaggtgactgaccaccattttcac
caatacatcaaccccgagcgtgaggtcgatgagggtgcattccaggtgcacggtatttcc
gatgaaatgctggcagacaagccgaaattcaagcaaatcgccaaagactttcttgatttt
gtgcagggcagcacgctgatcattcacaacgcatcattcgatatcggttttctggatggt
gaacttgaacgtctgggcttgggcaagatggccgactatgtggacggcgtaatcgattcc
ctgggcatggcgcgtgaaatgtttcccggcaaacgcaataacctggatgcgctgtgtgac
cgccttggggtgaataacgcacaccgtcagctgcacggggcgctgctggactcgcaaatt
ctggcggaagtttatttggcgatgacccgcgggcaagacagcctggtgattgatctgaat
gcgcatcatgaggacgatggtgtagagcgaatcaaactcagcgcgctgagtttgccagaa
cctgagcccaccgatgaggagttggtgctgcaccaagcctatttgacggacattgaaaaa
gcggccaaagggccaagcgtgtggagcaaaatcagccaggcgactgaagaacccgcagtt
taa
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