Limnobacter profundi: HKT17_05660
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Entry
HKT17_05660 CDS
T06583
Name
(GenBank) heme lyase CcmF/NrfE family subunit
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_05660
Transporters [BR:
limn02000
]
Other transporters
Others
HKT17_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
Motif
Other DBs
NCBI-ProteinID:
QJR29230
LinkDB
All DBs
Position
1215198..1217189
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AA seq
663 aa
AA seq
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MIALISQFSLALATVLALFGAVAGFAAVRGVYNHNPAVPLLKSIQRNVLLVSGLVSTAFV
GLVYSFAISDFSVRNVAENSNLALPVFYKVAASWGSHEGSFLLWVLMFAGWTQAVAWAKF
EVSACFKVRVLATLQLVLVGFLLYLLIASNPFEYLYPTPVDGRDLNPLLQDIGMIIHPPL
LYMGYVGFAVTFAFAVAGLLEGRFDMTWARWSRPWTNVAWAFLTMGIALGSWWAYRELGW
GGWWFWDPVENASLMPWLAGTALIHSLAVSEKRGALRSWTLLLALTTFALSLLGTFLVRS
GVLTSVHAFATDPERGVFILALLFLVVGSSYILYALKTGEVGQGGNFKATGRESLLLSNN
VLMSAALVAVMLGTLYPLVVEVIGGRKMSVGQPYFEAMFAPILLPAVLLMALGPDSRWRE
TRLAQYIKPGAVAFAVAVLVLLGAALFNGYFSLLWAVGVVCAVFMAVATLAHAAVATRRA
GANIPESGLLYRIRRLSLSYWGMVLAHLGVAVFVVGVSWVKTFETETDSVLKPGETSEIG
PWRVTFIGVDSVQRQNHVAALGVFELTRGDGTLIHLLEPEKRRYQSSEQIMTEAAIHSDW
FSDVYIGLGDAVQSSENAGAWGVRLYYKPLINLIWWGCALMALGGLLTVFDRRYRPRKNA
VAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgttgatatcccagttcagtttggcactggccactgtcttggccctgtttggt
gcggtggcggggttcgccgcagtgcgcggcgtgtacaaccataatccagcagttcctttg
ttgaaatcgattcaacgcaatgtgttgctggtctccgggctggtcagtactgcttttgtt
ggcctggtgtattcctttgctatcagcgatttctctgttcgcaatgtggctgagaattcc
aatttggctttgcctgttttttacaaggtggctgcaagctggggttctcatgaaggctca
tttttgctttgggtgctcatgtttgcgggttggactcaagcagtggcatgggccaaattc
gaggtgtctgcctgtttcaaagtgcgcgtactggccaccttgcaattggtgctggtgggt
tttctgctttatttgttaattgccagcaacccctttgaatacctgtaccccacacctgta
gatggacgagaccttaacccgctgctgcaagacattggcatgatcattcatccgcccctg
ttgtacatgggttatgtaggtttcgcagtgacttttgctttcgcagtggcaggtttgctc
gaggggcgcttcgacatgacctgggcacgctggagccgcccctggaccaatgtggcctgg
gcctttttgaccatgggtattgccttgggcagctggtgggcttatcgcgaactgggctgg
ggtggttggtggttttgggaccccgttgaaaacgcatccttgatgccatggctggcgggt
acagcattgatccactctttggccgtgtctgaaaaaaggggtgccttgcgcagttggact
ttgctgctggcgctcaccacgtttgctttgtcgctgttgggtacatttctggttcgctcg
ggtgtgcttacctcggtgcatgctttcgcaacagaccctgaacgtggcgtgttcattctt
gccttgttgtttcttgtggtgggttcttcctacattctgtatgcccttaaaacaggtgag
gtcgggcagggtggtaacttcaaggccactgggcgcgagtcgctgctgttgtccaacaac
gtgctgatgagtgctgctttggtggctgtgatgttgggcaccctttaccctttggtcgtc
gaggtgattggtggtcgaaaaatgtcggtggggcagccttacttcgaggccatgtttgcg
cctattttgttgcctgcggtcttactgatggcattgggccctgattcacgctggcgcgaa
acgcgtttggcgcaatatatcaagccgggggcggtggcttttgctgtggctgtgctggtg
ttgttgggcgcagcgctattcaatggttatttcagcctgttgtgggctgttggtgtggtg
tgtgcggtgttcatggcggtggccacgctggcccacgcagcggtggccacacgcagagca
ggggccaacattcccgaaagcggtttgctgtatcgcatacgccgtttgtccttgtcctat
tggggcatggtgcttgcgcatttgggagtggcggtgtttgtggtgggtgtcagctgggta
aaaaccttcgagactgaaactgattctgtgcttaagccaggagaaacctctgaaattggc
ccatggcgtgtcactttcattggcgttgattccgtacagaggcaaaaccatgtggctgct
ctgggcgtgttcgagttgacccgtggcgatggcaccttgatccacttgctggaaccggag
aaacgtcgctatcaaagttcagagcaaatcatgactgaagcggccattcacagcgattgg
ttttctgatgtttacattggccttggcgatgcagttcaaagcagtgaaaacgccggggcg
tggggcgtgcgcctgtattacaagcctttgatcaacctgatttggtggggctgtgcgctc
atggcactgggtggtttactcaccgtatttgatcgccgttatcgccccagaaagaatgcg
gtggcgtcatga
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