Limnobacter sp. SAORIC-580: HKT17_06280
Help
Entry
HKT17_06280 CDS
T06583
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
limn
Limnobacter sp. SAORIC-580
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
AAA_16
HTH_30
nSTAND3
HTH_29
HTH_28
AAA_29
HTH_23
TIP49
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QJR31087
LinkDB
All DBs
Position
1354640..1355998
Genome browser
AA seq
452 aa
AA seq
DB search
MDAQPRKGLSALAVDDEPGMRHFLEKALETRFARVDTAGSVEMAQALFDGHDYSTVVLDV
SLPGKSGLQWLNELRQGGYEGDVILITGYADMDTAIGALRAGAQDFLQKPFRIDQLWYAL
DRAADQNRLKRENFVLKRAVSNLQQNEQVMVGESPIVRQLRKLVAKVAPTDSTVLLTGES
GSGKEVLARTLHGMSLRSERPFVPINCGAISPELIESELFGHAKGAFTGANESHQGLFYY
AQGGTLFLDEIGELPLSMQTKLLRVLEDRRIRPVGSTKEVDVDVRIVAATNVNLDVEVKR
GRFRQDLYYRLQVMPIEMPPLRSRPEDIELLANYFIKVFAKKLRIDPLKISPDMLARLQA
YEWPGNVRELRNFIERSLILGYFPKEDLPLNLDLDEREHTAEDPQNESLEQVEKAHILRV
LNACSGNKSEAARRLGVSRKTLERKCMAWSQE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atagatgcccagccgagaaagggtttgtctgcgctggcggtggatgatgagcccggcatg
cgccattttctggaaaaggcgctcgaaacccgttttgcccgtgtagacaccgcaggttct
gttgaaatggcccaagccctgttcgacggccatgactacagcaccgtggtgctggatgtg
agcctgcctggtaaaagtggcctgcaatggttaaacgaattgcgccaggggggctacgag
ggcgatgtgattttaatcaccggctatgccgacatggacaccgccattggcgcactgcgc
gcgggtgcgcaagatttcctgcaaaaaccgtttcgaatcgaccagctttggtacgcgctt
gatcgcgccgcggatcaaaaccgtttgaaacgtgaaaactttgtgctgaaacgcgcggtt
tcaaacttgcagcagaatgaacaggtgatggtgggtgaaagcccgattgtgcgccaactc
cgaaagcttgtggccaaagtggctcccaccgattccactgtgttgctcacgggtgagtct
ggctcgggcaaagaagtattggcccgaacgctgcatggcatgagcctgcgcagtgagcgg
ccgtttgtgccaatcaactgtggcgccatctctccagaattgattgaaagcgagttgttt
ggtcatgccaagggcgctttcacgggtgccaatgaatcccatcagggcttgttctactac
gcgcagggcggcaccctgtttcttgatgaaattggcgaattgccgctcagcatgcaaacc
aaattgcttcgcgtgctcgaagaccggcgaattcgcccggtgggcagcaccaaggaagtg
gacgtggatgttcgtattgtggctgcgaccaacgtaaacctggatgtggaagtgaagcga
gggcggtttcggcaagacttgtactaccgcttgcaggtgatgccgattgaaatgccaccg
ttgcgcagccgccccgaggacattgagcttctggccaattacttcatcaaggtgtttgcc
aaaaagctgcgtattgatcccctgaaaataagcccggacatgctggcccgccttcaagcc
tacgaatggccaggcaatgtgcgggagctacgcaacttcatcgaacgttcattgattctg
ggttatttccccaaagaagatttgcctttgaatctggatctggatgaacgcgagcacact
gctgaagacccccagaatgagtcgcttgagcaggtcgaaaaggcgcatattcttcgcgta
ttgaatgcctgcagtggcaataaatccgaggcagcgcgccgcttgggcgtgtcccgaaaa
acacttgaacgaaagtgcatggcgtggagccaagaatag
DBGET
integrated database retrieval system
