Limnobacter profundi: HKT17_06860
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Entry
HKT17_06860 CDS
T06583
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limn03009
]
HKT17_06860 (der)
Ribosome biogenesis [BR:
limn03009
]
Prokaryotic type
GTPases
HKT17_06860 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
AAA_24
AAA_22
ABC_tran
AAA_18
Ras
AAA_14
ATP_bind_1
MeaB
SRPRB
Motif
Other DBs
NCBI-ProteinID:
QJR29452
LinkDB
All DBs
Position
1479006..1480331
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AA seq
441 aa
AA seq
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MKPVIALVGRPNVGKSTLFNRLTRTRDALVANQPGLTRDRHYGVGRIGPREYLVVDTGGL
EPVAKDGIYAEMAKQSRQAIVESDLVLFLVDGRQGVTPHDHVIAAELRKAKREVILVVNK
TEGYTHSMAAADFFELGLGEPETISASHGDGVRQLMDIACEKLPVLPEDEEGGRRIKVAI
AGRPNVGKSTMVNTLLGEERVIAFDLPGTTRDSIYIDFERNDKPYTLIDTAGLRKRGKVF
ESVEKFSVIKTLQAIEDANVVILMLDAQQDISDQDASIAGFIVEAGRSLVLAVNKWDSLD
DYRKERIKAEVGRKLTFLNYAKFHYVSATKPFGIAAMMKSVDEAHAAAFAKLSTPKLTRL
IQECVEHQQPPRKGIFRPKLRYAHQGGQNPPIVIVHGTALDAIPDNYKRYLETRIRERFK
LDGTPLRVEFRSNVNPFDKKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgtcattgccctggttgggcgcccaaacgtgggcaagtccacattgttcaat
cgcttgacccgaacaagagacgccttggtggccaaccagcctggtctaactcgtgatcgc
cattatggtgtaggccgtattggccccagagaatatttggtagtggacactggcgggctt
gagcctgtggccaaagacggtatttacgccgaaatggccaaacaaagccgacaggcaatt
gttgagtctgacctggttttgtttcttgtggatggtcgccaaggcgtcaccccgcacgac
cacgtgattgccgcagagctgcgcaaggccaagcgagaagtaattctggtggtcaacaaa
accgagggctacacccactcgatggccgccgccgacttcttcgagttgggtttgggcgaa
ccggagaccatatctgccagccatggcgacggcgtgcgccagttgatggacattgcttgt
gaaaagctgcctgtgttgcccgaagatgaagagggcggaaggcgcatcaaggtggccatt
gccggacgtcccaatgtgggcaagtccaccatggtaaataccttgttgggtgaagaacgc
gtgattgcgttcgatttgccgggtaccactcgcgacagtatttatattgatttcgagcgc
aatgacaagccttataccttgattgacacagccggtttgcgcaagcgcggtaaggtgttt
gagtcggttgaaaagttttcagtgattaaaaccctgcaagccattgaagacgccaatgtg
gtgatcttgatgctggatgcccagcaggatatttccgatcaagacgcctctattgctggc
ttcattgttgaagcggggcgttcactggtgttggctgtgaacaaatgggacagcctggat
gattaccgcaaggaacgaatcaaggctgaagtagggcgcaagctgactttcctgaattac
gccaagtttcattacgtgtctgccacaaagccttttggaattgcagccatgatgaaatca
gtcgatgaagcgcacgccgcggctttcgccaagttgtcaacgcccaaactgacgcgcctg
attcaggagtgtgttgagcaccaacaacccccacgcaagggcatattcaggcccaaattg
cgctacgcgcaccagggcgggcagaacccgcccattgtgattgttcacggcacagcgctg
gatgccattcctgacaactacaagcgttacttggaaacccgaattcgcgagcgtttcaag
ctggatggaacgccgcttcgggttgaattccgaagcaacgtgaacccgtttgacaagaaa
gattaa
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