Limnobacter profundi: HKT17_07160
Help
Entry
HKT17_07160 CDS
T06583
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
limn
Limnobacter profundi
Pathway
limn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HKT17_07160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_07160
02044 Secretion system [BR:
limn02044
]
HKT17_07160
Transporters [BR:
limn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HKT17_07160
Secretion system [BR:
limn02044
]
Type I secretion system
Adhesin protein transporter
HKT17_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
DUF87
AAA_18
HerA_C
AAA
NACHT
MobB
AAA_22
AAA_16
AAA_28
ATP-synt_ab
nSTAND3
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QJR29506
LinkDB
All DBs
Position
complement(1544178..1546301)
Genome browser
AA seq
707 aa
AA seq
DB search
MLQDPRPIKPLQHALCSVLKNVGLEFLPSQWALQANLAETGSDPELNQLLAYLSACNISR
QLFQNVSTSEIKHLGPHTLAMLHNGQCGLLEELIASNSPPASLKWALQIEAPQTTEDTRS
EPAPASLFEFWQQLRDSQWLREALDFENGSFKPVIYASLLINLLALAGPLFSLQVYDRII
PNQAYASMIALLFGVFLCLGFEHALKHARHRLMEIAATSIDTRCTMHLSKSLLNVPIHKT
EPTLLLQHLRSFEQLRELVTGVFLLALIDLPFLLLFLAVIALIHPLFLLISGGVIGLTLL
FIATSHRTISRLGQTQMRQSRETQSQWLDSLACLDNIQAHGVQQAHSKLLNKLQLKSRLS
GNAVRDQMFLINQRIHLLQQGSWVLTIALGVYFIVEKQLTVGGLIAVSMLTMRCFAPIQK
LQAHLVQTHSAQASFEELDRFLGQQTQTTEQRAALERIDTMALEFVSVLKPGRNSETAQP
FDFILRAVNLQLHAGNRLGIIGTTGSGKTSLLKLLAQQLKCDHGQLAVNKLSIAHFHSSE
FQSKVGYASQPPVLIKGSLLDNIRFMRPHISTENCWKILQQLGLKEWVDQHPDGIHMAID
SQGNNLSSGQKQAVSLCRALAGQPQLVLLDEPTVCLDQHMESQLMRHLQQLPEHSILVFT
THKLGLLACASSLALMHKGQIHAQGNKPEVLHAANALATQHKQKNAG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctccaagacccccgcccaatcaaaccattgcaacacgccttgtgcagcgtgctgaaa
aacgtggggctggagtttttacccagccaatgggcattgcaagccaatttggctgagaca
ggaagcgaccccgaactgaatcaattgttggcttatctatcagcctgcaatatttctcgg
cagctgtttcaaaatgtgtccaccagtgaaataaaacaccttggtccacacacgctggcc
atgttgcacaacggccagtgtggcttgcttgaagaactgattgcatcgaattccccacca
gcgtccttgaaatgggccctgcaaattgaagccccccaaaccactgaagacacccgaagc
gaaccagcgccggcaagcctgtttgagttttggcaacagcttcgtgatagccaatggttg
cgagaagcactcgattttgagaatggaagcttcaagccggtgatctatgcctctctgttg
atcaacttgctggccctggcaggcccgctgttctcgctacaggtgtatgaccgcatcatt
cctaaccaggcctatgcatcaatgattgcattgctgttcggtgtatttctttgcctgggt
tttgagcatgctttaaagcatgcgcgccatcgcttgatggaaattgcggcaacctccatc
gacacccgctgcaccatgcacctgtcaaaatcactcttgaatgtgcccatccacaaaacc
gaaccaaccctgcttttgcagcaccttcgttcgttcgagcaactgcgtgaattggttaca
ggcgtgtttctgcttgcgctgattgacctgccatttctgctgctttttctggcggtaatt
gccctgattcacccccttttcctgttgatctcgggcggagtaattggactcaccttgctg
ttcatcgccacatctcaccgaacaatttcccggctcgggcaaacacaaatgcggcaaagc
cgcgaaacccaaagccaatggctagactcgctggcctgtctggacaacattcaggcacac
ggcgttcagcaagcacacagcaaattgttgaacaaacttcagcttaaatcgcggctaagc
ggcaatgcagttcgcgatcaaatgtttttaatcaatcaacgaatacacctgttgcaacaa
ggcagttgggtactgaccatcgcgctgggtgtttatttcattgttgaaaaacaactcacc
gtgggtggcttgatcgcagtctccatgctcaccatgcgctgctttgcacctatccagaaa
ttacaggcccacctggtacaaacccattcggcccaggccagcttcgaagaactggaccgg
tttttggggcaacaaacccaaaccactgagcaacgcgctgctcttgaacgcatcgacacc
atggcccttgaatttgtaagcgttttgaaacctggccgtaacagcgaaactgctcaacct
tttgacttcatactgcgcgccgtgaacctgcaactgcacgcgggaaaccggcttggaatc
atcggtacaactggctctggaaaaacctccctgctcaaactgctggcccaacaactgaaa
tgcgatcacggccaactggcggtcaacaagctttcgattgcacattttcacagcagtgaa
tttcaatccaaagtgggttatgcaagccaacccccggtgctgatcaagggcagtttgctc
gacaacattcgcttcatgcgcccgcacatcagtactgagaactgctggaaaattctgcag
caacttgggctcaaagaatgggtagatcaacacccggacggcattcacatggcaattgac
agccagggcaacaacttgtcttcagggcaaaagcaggctgtatcgctgtgcagagcgctg
gcgggccaaccccaattggtgcttctggacgaacccaccgtgtgtcttgatcaacacatg
gagagccagctgatgcgacatttgcagcagctgccagaacacagcattttggtattcacc
acacacaagcttgggctattggcttgtgccagcagccttgcactgatgcacaagggacaa
attcacgcgcagggcaacaagcctgaggtactgcacgcagccaatgcacttgccacacaa
cacaaacaaaaaaatgcaggttga
DBGET
integrated database retrieval system
