Limnobacter profundi: HKT17_07240
Help
Entry
HKT17_07240 CDS
T06583
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limn03009
]
HKT17_07240
Enzymes [BR:
limn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HKT17_07240
Ribosome biogenesis [BR:
limn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HKT17_07240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Motif
Other DBs
NCBI-ProteinID:
QJR29520
UniProt:
A0ABX6N550
LinkDB
All DBs
Position
1564590..1565597
Genome browser
AA seq
335 aa
AA seq
DB search
MKTQEKPNPDRAVLLEIDEKHQDQRLDNFLCSVCKGVPKSHVFRIIRSGEVRINKKRAEA
KTKLCLGDVVRIPPVQVVEKQTLESLSSSSAVNKTQLLKAAAEIPVLFEDEHLLVVNKPS
GMAVHGGSGSSFGLIECIRALRAETHQDLELVHRIDRETSGILIISKKRSALRKLQEQLR
ARSWKKYYKTLVLGSWPETLRQVDLPLLKTQAGEKEARVFVDEAGDKACTKFQIIQTYKS
SYSIFTLIQAQILTGRTHQIRVHTSANKFPIAGDDRYGNFEMNKQLARQGLKRMFLHAAR
LHLVHPATNETIVLEAPLAPELDSFLKSLQAVQSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaggaaaaacccaatcccgacagggctgttttgctcgaaattgacgaaaaa
catcaagaccagcgattggacaactttttgtgcagcgtatgtaaaggcgtgcccaaaagc
catgtattccgaattatcaggtccggagaggttcgaatcaataaaaagcgtgccgaagca
aaaaccaagctatgccttggtgatgtggtacgtattcctcctgttcaagttgttgaaaaa
caaacacttgaatctctttcgtcaagtagtgctgtaaataaaacgcaacttttaaaagca
gccgctgaaatccccgtgttgtttgaagacgaacatttgctggtggtcaacaagccttct
ggcatggcagttcatggtgggtcgggttcaagcttcggattaattgaatgtattcgagca
cttagggctgaaacccatcaagatttggagcttgttcaccgcattgaccgtgaaacctcc
ggaatcttgattatttccaaaaagcgcagtgctctccgaaagttacaagagcaacttagg
gccaggtcctggaaaaagtactataaaaccttggtgttgggttcttggccagaaacactt
aggcaagttgatcttccgttgttgaaaacacaggctggcgaaaaagaggcgagggttttt
gttgatgaagctggtgacaaagcctgtacaaagtttcaaataattcaaacctataaatca
tcttattcaatatttactttaattcaagctcaaattctgacaggtcgaactcaccaaatt
agagtgcataccagtgccaacaaatttccaattgctggcgatgatcgctatggcaatttt
gaaatgaacaagcagcttgccaggcagggcttgaaacgcatgtttttgcacgcagcacgc
ctgcatctggttcatccagccacaaatgaaactatagtattggaggcgccattggccccc
gaattggacagttttttaaaatcgttacaggcagtacaaagcagatga
DBGET
integrated database retrieval system
