Limnobacter profundi: HKT17_07350
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Entry
HKT17_07350 CDS
T06583
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
limn
Limnobacter profundi
Pathway
limn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HKT17_07350 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_07350 (recO)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HKT17_07350 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HKT17_07350 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QJR29540
UniProt:
A0ABX6N6M2
LinkDB
All DBs
Position
1583858..1584592
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AA seq
244 aa
AA seq
DB search
MNNTRSNTDFAYVLHSVPYKETSLIVELFCKEHGRLPVVAKGAKRPHSGLRAVLVSFQPL
SVRFTGKSEVKTLMQAEWLGGLMSPDGKALFAAYYLNELLMRGLSREDTHPDLFELYQNT
LLGLAGGDDMNVCIRQFEVGLLQSLGYGFDWQQDRAGVAIDPDRHYVWQEQEGWAPSDGG
NVNNSTNSSVEQLVQGLWIAEIQNGIWSKSAASALKPITRKLLMTHIAPNGLMSRVWMEH
LLRA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaataacactcggtccaacactgattttgcctatgtactgcacagtgtgccgtacaag
gaaaccagtttgattgttgagctgttttgcaaggaacacgggcgcctgccagtggtggcg
aagggcgcaaaaagaccgcattcaggtttgcgggcagtgttggtcagctttcagccgctt
tcagtgcgctttactggcaagtcggaagtaaaaaccctgatgcaagccgagtggctgggc
ggtttgatgtcgccagatggcaaagcattgtttgcagcgtactatctgaatgagctgctt
atgcgcggtttaagccgtgaggacacgcaccctgatctgtttgagttgtatcagaatacc
ttgctgggtttggctgggggcgatgacatgaatgtgtgtattcgtcagtttgaggtgggc
ttgcttcagtccctgggctacggctttgattggcaacaagacagggccggtgttgcgatt
gatcccgatcgtcactacgtgtggcaagagcaggaaggctgggctccctcagacggggga
aatgtaaacaattcgacgaacagcagcgttgaacagctagtccagggtttgtggattgct
gaaattcagaatggcatttggtcaaagtctgctgcaagtgccttgaaaccaattacccgc
aaactgttgatgacgcacattgcgccgaatggtttgatgtctagagtctggatggagcat
ttgttaagagcatga
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