Limnobacter profundi: HKT17_07890
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Entry
HKT17_07890 CDS
T06583
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
limn03036
]
HKT17_07890 (smc)
Chromosome and associated proteins [BR:
limn03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HKT17_07890 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
Pox_A_type_inc
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QJR29639
LinkDB
All DBs
Position
complement(1686313..1689840)
Genome browser
AA seq
1175 aa
AA seq
DB search
MRLTHIRLAGFKSFVEPTSFAVPSNLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES
MQDVIFNGSTNRKAASRASVELVFDNAEGRAGGSWNQYSEISVKRVLTRDGASTYYINQQ
AVRRRDVQDIFLGTGLGPRAYAIIGQGMIARIIEARPEELRIFLEEAAGVSKYKERRRET
GNRLADTRDNLTRIEDILRELTSQIERLEQQATVARQFKELEEAKNTKQRLLWYIRYSEA
LEQKNTGQAKLERAKADLEAIQSKSISTQTELFAVREKQVDAQQQLENDQTQWIESNRQV
SRLEADLRVMAESRARLGTRVAELELEIQNWTVREEDAKARLEEISGSTEEQQAELEERI
IALEEAELAVEPVELALQAARSAVDQKRAGVMQIQQALGQVSSQQESASRAENTIQVKLD
RLESEKQQIAAPSVHEMDEVQSRVHSLERELDNATGNLAEFESKLAAGGAELDHVQASFN
AERDKHANAQAQLQALEKLNEQLAESAELKPWVESSGLGDTPRLLGKLQVERGWERALES
ALRESLDSFQVRTLDMVEGFAKQPLPARVAFMESASQGGGSNLSVGPEDLASLVRCTDSA
IQQSLIQSLAGYLLAPDLQAALAKRKTLKPGQRIFTPQGHCVSATGVSFYAADNAQSGRL
ERQQQIEALRTEVRALDMLKNESMAKRDQLQLRTGEMKAHVVQARQLVESLTKRLHEAQV
QLIRLQEQQSRADSRREQIGLDLALLQSELEEQRAILLESEDRYAELDEQLAVASDALES
QKDKVTEAEQALRDKQAQVQNALRKKQDAEFNIRNQESRQRECERDIAFASSQIQQIQQR
KQLALAELEGLSETEGQEALQLALEERVIAEEKVAVSRDALEQIMAKVSELERAEKESDK
QADPLRDAVQDLALKIQAAELTIEQYKNLMDEVQADVNELGQQFVAMDVPPKASVLQAEV
TRLTNGMQELGAVNLAALDELAAATERKSFLDQQAGDLIEAMETLEDAIRKIDKETRDLL
SETFGVVNGHFSRLFPKLFGGGEARLVMTGDEILDAGVQVFAQPPGKKNGTIHLLSGGEK
ALTATALVFAIFELNPAPFCLLDEVDAPLDDANTERFTRLVKQMSEQTQFLFISHNKIAM
EMAQQLIGVTMQEKGVSRIVAVDLAAAEKMATETI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattaactcacattcgtttagctggctttaagtcatttgttgaaccaacgtccttt
gccgtgcccagtaatctggtgggtgtggtgggtccgaacggctgtggcaaatccaacatc
atcgacgcggtacgctgggtactgggtgaatccaaggcgtcggagctgcgtggcgaatcc
atgcaagacgtgatctttaatggctccaccaaccgcaaagcggcctcgcgtgccagcgta
gagctggtgtttgacaatgcagaaggcagggcaggcggcagctggaaccaatattccgaa
atttccgttaaacgcgtgctcacacgcgatggcgcttcaacctattacatcaaccagcag
gcggttcgccgccgcgacgtccaggatattttcctgggtacaggtcttgggccacgcgcc
tatgccattatcgggcagggcatgattgcccgtattattgaagcccgcccggaagaattg
cgcatttttctggaagaggccgcaggtgtatcgaaatacaaggaacgccgccgggaaact
ggcaatcgtttggccgacacgcgcgacaacctcacccgtatcgaagatattcttcgcgaa
ttgaccagccagattgagcgactggagcagcaagccaccgtggcgcggcagttcaaggaa
cttgaagaggctaaaaataccaagcagcgcttgctttggtatatccgctattccgaggcg
ttagagcagaaaaatactggccaggccaagcttgaacgtgccaaagctgatcttgaggcc
attcaaagcaaatcgattagcacccaaacagaactgtttgctgtgcgtgaaaagcaggtg
gacgcccagcaacagctggagaacgaccaaacccaatggattgaatccaacaggcaagta
agccgtcttgaagctgatttgcgcgtgatggctgaatcacgcgcacgcctgggtactcga
gtggccgagcttgaacttgaaattcaaaactggactgtgcgggaagaagacgcgaaggca
cgattggaagaaatcagtggttctaccgaagaacagcaagccgagctggaagaacgaatt
attgcccttgaagaggccgagctggccgtcgagccagttgagctggccttgcaggctgcg
cgatccgctgtagaccaaaaacgcgccggtgtcatgcaaatacagcaggcacttggccag
gtttcttcgcagcaggaatcagccagccgtgccgaaaacacgattcaagtgaaattggat
cggcttgaaagcgaaaagcagcaaattgcagcaccttcggtacacgaaatggacgaagtc
caatctcgggtccattcccttgaacgggagcttgacaatgccaccggcaaccttgctgaa
tttgaaagcaagttggctgctggtggtgccgaacttgatcatgttcaagcctcattcaat
gctgagcgggacaagcatgccaacgcgcaggcgcaattgcaggcacttgagaaattaaac
gagcaacttgccgaaagcgctgagttaaagccctgggttgaaagtagcggccttggcgat
acaccgcgcttgttgggcaagttacaagtggagcgtggctgggaaagggcacttgaatcg
gcgctgcgggagtcgcttgacagctttcaggtacgaacgcttgacatggttgagggcttt
gccaaacagccactccctgcacgcgtggctttcatggaatcagcgagtcagggcggtggt
tcaaacctttctgttggtccggaagacctggccagcctggtgcgctgcaccgactctgcc
attcagcaatctttgattcaatcactggctgggtacctcctggcccccgatttgcaagcc
gcactggcgaaacgaaaaaccctgaagccaggccagcggatcttcacgccacaagggcat
tgtgtcagcgccacaggcgtgtctttttatgcggcagacaatgcgcaaagcggtcggctt
gagcgccagcagcaaatagaagccctgcgtacagaagtgcgcgcgctagacatgttgaaa
aatgaatccatggccaagcgcgaccaactgcaattgcgcacgggtgaaatgaaagcccat
gtggtgcaagcgcgtcaactggttgaaagtttgaccaagcgactgcatgaagcccaggta
caactgattcgcttgcaagagcagcaaagcagggcagacagccgccgggaacaaattggt
ttagacctggctttgttgcaaagcgaactggaagaacagcgggcaattttacttgaatcg
gaagacaggtacgccgaactggatgagcagcttgccgtcgccagcgatgcgctcgaaagc
cagaaagacaaagtgactgaagcagaacaggcgctgcgcgacaaacaggcgcaggtgcag
aatgcgctgcgtaaaaagcaggatgcagaattcaatattcgtaatcaggaatctcgccaa
cgcgaatgtgaacgcgacattgcttttgcaagcagtcaaattcagcaaattcagcaacgc
aaacaattggcgctggctgaacttgaggggctttctgaaaccgaaggtcaagaagcattg
cagcttgccttggaagagcgcgtaattgcagaagaaaaagtggcagtttctcgtgatgcg
ctagaacaaatcatggcgaaggtatctgagcttgaacgtgcggaaaaagaaagtgacaag
caggctgatccactgcgggatgcggtacaagacctcgcattaaaaattcaggccgctgaa
ctcaccattgaacaatacaagaatttgatggacgaagtgcaggccgatgtaaacgaattg
ggtcagcaattcgttgccatggatgtacctccgaaagcatcagtgcttcaggccgaagta
acccgccttaccaacggcatgcaagagttgggagcagtgaacctggctgcgctggatgaa
ctggctgctgcaacagagagaaaatcattccttgaccaacaggccggcgacctgattgaa
gccatggaaacccttgaggatgcgatccgcaaaattgacaaagaaacacgcgaccttctc
tccgaaacttttggtgtggttaacgggcatttctcgcgcctctttcccaagttgtttggt
ggtggagaagcccgcttggtcatgactggcgacgaaattctggatgcaggcgtgcaggta
tttgcccaacctcccggcaagaaaaacggcaccattcatctcttgtcgggtggcgaaaaa
gcactaacggccacagcactggttttcgcaattttcgagttgaatcctgcaccgttctgc
ctgctcgacgaagttgatgcaccgctggacgatgcgaacaccgagcgtttcacccgcttg
gtcaaacaaatgtctgaacaaacccagtttttgttcatttcccacaataaaatcgccatg
gaaatggcgcagcagctgatcggcgtcacgatgcaggagaaaggtgtttcccgcattgtt
gccgttgacctggcggctgcagaaaaaatggcaacggaaaccatatga
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integrated database retrieval system
