Limnobacter sp. SAORIC-580: HKT17_08385
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Entry
HKT17_08385 CDS
T06583
Name
(GenBank) LysR family transcriptional regulator
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
limn
Limnobacter sp. SAORIC-580
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limn03000
]
HKT17_08385
Transcription factors [BR:
limn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HKT17_08385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
QJR29727
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Position
complement(1793285..1794217)
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AA seq
310 aa
AA seq
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MSKSILELRHLRTLQAIEQTGSLSRAADVLCITQSAVSHQVKALEDWFGEELVYKQGGQS
RFSVVGQRLLQLAGQVLGQVDQAELDILQMKQGAGGPLRVAVECHTCFDWLMPSMDVYRN
RWPEVELDIVSGFHADPVGLLHKGDAELAIVSELCEEEGIVSFPLFRFEMVGLVPVDSKL
AKRAYLKPTDFAGETLLTYPVPDDMLDVIKHFLMPAGVQVKRRSSELTVALLQLVASKRG
LSALPAWAVKGYVDRGYVAQVPLGRKGLMSTLYAALPKAIAGKHYTADFVAVMREVCARE
LDGIELLGDD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtattctggaattgcgccacctgcgtaccctacaggccattgaacaaacc
ggcagccttagccgtgcggccgatgtgctgtgcattacccaaagtgcggtgtcgcatcaa
gtcaaggcgctggaagactggttcggcgaagaactggtgtacaagcaaggcggccaaagc
cgattcagtgttgttgggcaacgactattgcagcttgcaggccaggtgctggggcaggtt
gaccaggccgaactggatattctacaaatgaagcagggggcaggcggcccactgcgtgtg
gccgttgaatgccacacctgctttgactggctgatgccatcaatggacgtgtaccgtaac
cggtggccagaagtggaactggacattgtttccggttttcatgccgacccggtggggctg
ctgcacaagggcgatgcggaactggcaattgtgtccgagctttgcgaggaagagggcatt
gtttccttcccgctattccggtttgaaatggttggcctggtgcctgtggattcaaagctg
gccaaacgtgcttatttaaagcccactgatttcgctggtgaaaccttgttaacctacccg
gtacccgacgacatgctggacgtgatcaagcattttttgatgcccgcgggtgtgcaggtg
aaacgccgcagcagtgaactgaccgtggcgctgttgcaattggtggccagcaaacgcggg
ctttcagccttgccagcctgggcggtgaaaggctacgtggaccgcggttatgtggcccag
gtgcctttgggtagaaagggtttgatgtcaaccttgtacgcagctttgcccaaagcgatt
gccggtaagcactacaccgctgattttgtggcggtgatgcgtgaagtgtgcgcccgtgaa
ctcgatggaattgagttgttgggtgatgactag
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