Limnobacter profundi: HKT17_08825
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Entry
HKT17_08825 CDS
T06583
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
limn
Limnobacter profundi
Pathway
limn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HKT17_08825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_08825
Transporters [BR:
limn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HKT17_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
UCR_Fe-S_N
TAT_signal
DUF3918
Motif
Other DBs
NCBI-ProteinID:
QJR29807
LinkDB
All DBs
Position
1891151..1892269
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AA seq
372 aa
AA seq
DB search
MTDSVNNQKRRDFIKGTSVAAVGAGAMAFPMISTAQTVNMRFQSTWPQKDIFHEYAVDFA
DKVNSMTGGRLKIEVLPAGSVVKAFDLLDAVNKGTLDGGHGVIAYWYGKNAAVALWGSGP
SFGMDANMLLAWHKYGGGKELQEEIYKELNMDVVSFMTGPMPTQPLGWFKKPVTKAEDLK
GLKFRTVGLSVDMFTKMGVAVNALPGGEIVPAMDRGLLDAAEFNNASSDRLLGFPDVSKV
CMLQSFHQSSEQFEVMFNKTKYNKLPAEIKAIIANAAEAASADMSWKAIDRYSKDYAEMQ
SKDGVKFFKTPDSILKAQLAAWDAVTKEKAASNPMFKKVLDSQRAFAARAAKWQADTSVD
FKMAQAFYAQKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcagtgaacaaccaaaagcgccgcgattttatcaaaggcacatcagtggct
gcagtaggtgcaggcgccatggcgttccccatgatttccactgctcaaacagtgaacatg
cgcttccagagcacatggccccagaaagacattttccacgaatatgcagttgactttgcc
gacaaagtaaacagcatgaccggtggtcgcctgaaaattgaagtactgccagctggttca
gtggtaaaagctttcgacttgctggatgcggtgaacaagggcacactggacggtggtcac
ggcgtgatcgcttactggtacggcaagaacgcagcggtagcgctgtggggttcaggccct
tctttcggcatggacgcaaacatgctgctggcctggcacaagtacggcggcggtaaagag
ctgcaggaagaaatctacaaagaactgaacatggacgtggtgtccttcatgactggccca
atgccaacccagccactgggctggttcaaaaagccagtgaccaaggctgaagacctgaaa
ggtctgaagttccgtaccgttggcctgtctgtagacatgttcacgaaaatgggtgttgca
gttaacgcattgcctggcggcgaaatcgttccagcgatggaccgtggcctgctggatgca
gctgaattcaacaatgcatcttcagatcgcctgttgggcttcccagacgtatccaaagtt
tgcatgttgcagtcattccaccagtcttccgaacagtttgaagtcatgttcaacaagacc
aagtacaacaaactgccagcagaaatcaaagcgatcatcgccaacgctgctgaagctgct
tctgccgacatgagctggaaggcaattgaccgttattccaaagactacgctgaaatgcaa
agcaaagacggtgtgaagttcttcaaaacacctgacagcattttgaaagctcagctggct
gcgtgggatgcggtgaccaaagaaaaggccgcctcaaacccaatgttcaagaaagtactt
gattcgcagcgtgcatttgccgcacgtgcagccaagtggcaagccgacacatccgtcgac
ttcaagatggcacaagcgttctacgcacaaaagaagtaa
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