Limnobacter profundi: HKT17_08960
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Entry
HKT17_08960 CDS
T06583
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_08960 (radA)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HKT17_08960 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
AAA_24
GvpD_P-loop
AAA_16
AAA
RecA
AAA_14
Rad51
TniB
GvpD_bR2
SLFN-g3_helicase
DUF7125
DUF7129
nSTAND3
NACHT
MCM
ABC_tran
KdpD
AAA_5
CobU
Zn_ribbon_8
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QJR29829
LinkDB
All DBs
Position
complement(1923198..1924580)
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AA seq
460 aa
AA seq
DB search
MAKIKSQYQCTECGAVFAKWQGQCTDCSSWNTLVESAVSTAAPPKHSRFAALAAQSSSVI
KLSEIQAQDHPRFSSGVPEFDRVLGGGMVPGMVVLLGGDPGIGKSTLLLQSMVTLAKTTS
ALYVSGEESAGQIALRAQRLGLEHTNLNVLTEIQLEQIVAQLETHKPQVLVIDSIQTLYT
SELSAAPGSVSQVRECASQLTRLAKAMGVTTILVGHVTKEGTLAGPRVLEHIVDTVLYFE
GDSQSSFRLVRAFKNRFGAVNELGVFAMTDRGLKGVNNPSALFLSQTAEWVAGSCVMCTQ
EGARPLLVEIQALVDSSHSPSPRRLSVGLEQNRLAMLLAVMHRHAGLQFFDQDIFINAVG
GVRISEPAADLAIVLAMVSSLRNKRLPKELVVFGEIGLSGELRPAPRGQERLREAAKLGF
THAIVPASNAPKQPIDGIEVIGVDRVEKALAALRDKLDCF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaattaaaagtcaatatcagtgcactgaatgcggtgccgtgttcgccaaatgg
caggggcaatgtaccgattgcagcagctggaacacgctggttgaatcggccgtgagcacg
gcagcgccgcccaagcacagtcgctttgctgctctggctgcgcaaagcagcagtgtgatc
aagctttccgagattcaggcgcaagaccatccacgtttcagcagtggtgtacccgaattt
gaccgtgtgctgggaggtggaatggtgcccggcatggtggtgttgctgggtggcgaccct
ggcattggtaaatccaccttgttattgcagtctatggtcaccttggccaaaaccacatcg
gccttgtatgtcagcggcgaggaatctgccgggcaaatcgccttgcgcgcccaacgcctt
gggctggaacacaccaacctgaatgtattgaccgaaattcagctggagcaaattgttgcc
cagcttgaaacacacaaaccgcaagtgctggttatcgactccattcaaaccctgtacacc
agcgagttaagcgctgcgccgggatcggtcagccaggtgcgcgaatgtgcaagccagctg
acacggcttgccaaagccatgggggtcaccaccattttggtgggccacgtcaccaaagag
ggtacccttgcagggccgcgtgtgcttgaacacattgtggacaccgtgctgtatttcgaa
ggggattcacaatcttcattccgtttggtgcgtgcatttaaaaaccggtttggtgcggtg
aacgaactgggcgtgtttgccatgactgaccgtggtttgaaaggtgtcaacaacccctcg
gccctgtttttgtcgcagacggctgaatgggtggctggttcctgtgtaatgtgcacgcaa
gaaggagcaaggccattgctggttgaaatccaggctttggtggattcctcgcattcacct
tcaccgcgcaggttgtcagtgggcctggagcaaaatcgcctggccatgttgctggcggtg
atgcatcgccatgcgggccttcagttttttgatcaagatatttttatcaatgcggtgggc
ggcgtacgaatttcggaacctgcggccgacctcgcgattgttttggccatggtgtcctcg
ttgcgcaacaaacgcttgcccaaagagttggtagtgtttggcgaaatcggcttgtctggt
gagttgcgcccggcaccgcgtgggcaggaaaggctgcgcgaagctgccaaacttggcttt
acccatgcgattgtgccggccagcaacgcacccaagcagcccattgacggtattgaagtg
attggtgtggatcgagttgagaaggcacttgctgcgctgagagacaagctggattgtttt
tga
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