Limnobacter profundi: HKT17_09100
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Entry
HKT17_09100 CDS
T06583
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HKT17_09100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
VMAP-M7
Motif
Other DBs
NCBI-ProteinID:
QJR29854
UniProt:
A0ABX6N621
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Position
1959595..1961970
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AA seq
791 aa
AA seq
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MSLVQNRIIAQLAQELGAAQSQIKAAVDLLDEGATVPFIARYRKEATGGLDDAVLRDLQE
RLVYLRELEDRRSSILESIESQGKLTPELKAAIEKAENKQTLEDLYLPYKPKRRTRAQIA
REAGLQPLADEIFQNKQAVPEILAAAYLNTEHQINDTKAALDGARDILAEQFSENAALLA
LLRNRLKAEGAIRAAVVPEKASEAIKFQDYFEHQEPLSSTASHRMLAMLRGREQGFLTLK
VDLPEVWEAENPRAPHPFESEIARLHGIERDESPRGKFLNETCRWTWKIKLASTLESEVI
GTLRDAAQAEAITVFGKNLKDLLLSAPAGGKATMGLDPGIRTGVKVAVIDSTGQVVEHAT
IYPHEPRRQWNESIALLAALCMKHNVELIAIGNGTASRETDQLAADLLAQHKDLKATRVM
VSEAGASVYSASALASAELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV
DQRQLSGRLDAVVEDCVNAVGVEVNTASEQLLSRVSGLNASVAKALVSFRNSNGKFKSRE
DLRKVPRLGDKTFEQAAGFLRIHGAENPLDASSVHPEAYIVVEKMAAKVKKPVGSLVGNR
EILKELKPTEFVGDRFGLPTVQDILVELEKPGRDPRPSFKTAKFDDKVHTMADLKPGMTL
EGVVTNVANFGAFVDIGVHQDGLVHVSALSNTFVKDPHSVVKTGQIVKVKVLEVDIPRKR
ISLTMKMGDDVPKAAPGQNAGRQVQANRAGDARGNSRGERSGGSTGSNSQQGAGFANNAF
ATAFAKAKGSK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgttcaaaatcgaattatcgcccagttggctcaagaattgggtgccgcacaa
tcacaaatcaaggcagcagtcgatttgttggacgaaggcgccacagtgcccttcatcgcc
cgttaccgaaaagaggccacaggtgggttggacgatgcggtgcttcgtgaccttcaagag
cgcctggtgtatttgcgcgaacttgaagacaggcgcagcagtattcttgaatcgattgaa
agccagggcaagttgacccctgaactgaaagcagcaattgaaaaggcggagaacaaacaa
acgctggaagacctttacctgccctacaaacccaaacgccgcacacgcgcacaaatagcg
cgtgaggcaggcctgcagccactggcggatgaaattttccagaacaaacaagccgtgcct
gaaatattggctgcggcttacctgaacacagaacatcaaatcaacgacaccaaagcagca
ctggatggtgcccgcgacattttggccgaacagttttcagaaaacgctgccttgctggca
cttctaagaaaccgtttgaaagccgagggggccattcgagcagctgtggtgcctgaaaaa
gccagtgaagcaatcaagtttcaagattactttgaacatcaagaacccctgagcagcaca
gcctcgcaccgcatgttggccatgcttcgcggccgcgaacaagggtttctgacactgaag
gtagacctgcccgaagtgtgggaggctgagaacccccgtgcaccccatccttttgaatcg
gaaattgctcgcctgcatggcattgaacgcgatgaaagcccacggggcaaattcttgaat
gaaacatgccgttggacgtggaaaatcaaactggccagcaccctggaaagtgaggtgatt
ggcacgctgcgcgatgcggcacaggctgaggctatcaccgtgtttggtaaaaacctgaaa
gacttgttgttatcagccccggcggggggcaaagccaccatgggtctggaccctggtatt
cgcactggtgtgaaagtggcggtaattgacagcacaggccaagtggttgaacacgccacc
atttacccacacgagcctcgccgacagtggaatgaatccatcgccctgctggctgcgctt
tgcatgaaacacaatgtggagttgatcgccattggcaacggcaccgccagccgggaaacc
gatcaactggcagccgacttgcttgcacaacacaaagacctgaaagccacacgggttatg
gtgagcgaggcaggcgcctcggtttactccgccagcgctttggcttcagcagaattgcca
gaccttgacgtcagcattcgcggtgcagtgtctatcgcacgtcgcctgcaagatcccctg
gctgaactggtaaaaatcgatccgaaatcaatcggtgtgggccaataccagcatgatgtc
gatcaacgccaactgagcggccggctggatgcggtggttgaggactgcgtgaacgcagtg
ggtgttgaagtgaacacagcgtctgagcaactgctatcgcgcgtgtcagggttgaatgcc
tctgtggccaaagcgttggtgtcattcagaaacagcaatggcaaattcaaaagccgtgaa
gacttgcgcaaagtgccccggcttggcgacaaaacatttgagcaagcggctggttttttg
cgcattcatggtgctgaaaacccgctcgatgcctcttccgtacaccctgaggcctacatt
gtggtcgagaaaatggcagccaaggttaagaagccggtgggcagcctggtgggtaatcgt
gaaattctgaaagaattgaaacccaccgagtttgtgggcgatcgttttggcttgcccacg
gttcaggatattttggtagaacttgaaaaacctggccgtgacccacgccctagcttcaag
accgcaaagtttgatgacaaagtacataccatggccgacttgaaacccggtatgacgctg
gaaggtgtggtcaccaacgtggcaaactttggtgcttttgtggacattggtgtgcatcag
gacgggttggtgcatgtttctgccttgtccaacaccttcgtgaaagacccgcacagcgtg
gtgaaaaccgggcaaattgtgaaagtgaaagtgctggaagtcgatattccacgcaaacga
atttcactgaccatgaaaatgggcgacgatgtaccgaaagccgcacccgggcagaacgct
ggccgacaagttcaagccaaccgtgcaggcgatgcacggggaaattcacgcggtgaacga
agtggtggaagcactggttcgaattcacaacaaggcgcaggttttgccaacaatgcattt
gctaccgcgttcgctaaagcaaagggaagcaaataa
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