Limnobacter profundi: HKT17_09685
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Entry
HKT17_09685 CDS
T06583
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_09685 (truB)
Enzymes [BR:
limn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HKT17_09685 (truB)
Transfer RNA biogenesis [BR:
limn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HKT17_09685 (truB)
Prokaryotic type
HKT17_09685 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QJR31141
LinkDB
All DBs
Position
complement(2085638..2086672)
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AA seq
344 aa
AA seq
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MVVATVAETKKQKRALSGVLLFDKSTGFSSNQALQIVKRLYRAEKTGHTGTLDPLASGLL
PLMFGEATKFAADVIDASKTYRTKVRLGFSSNTGDAEGELTKVSTRALESITLDEVKQVC
AQFVGEIQQTPPMFSALKKDGKPLYEYAREGIELDRPARTLLIHQLDVMKVEHNTIHGES
SCTIELEVNCSKGTYVRTLGEDIAKALGTAGYLTELRRTAIGDLKVERAYTLDALKVLGE
SETPFDALDAVLFPVDALLGSLGKVELNNEFARRFSHGQRLPLSLVDAKPGRVRVYGETS
AQDVNTEVSNTAFKGNSRFMGTGILETDGKGALLRPDRLIQVNL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggcgacggtggcggagactaagaaacaaaagcgtgccttgtcgggtgtgctg
ttgttcgataaatcaactggtttctcgtccaatcaagccctgcaaattgtaaagcgcttg
tacagggctgaaaaaaccggtcacaccggtacgctagacccgctcgcaagcggtttgctg
ccattgatgttcggtgaggccaccaagtttgcagcagatgtaatcgatgccagcaaaacc
tatcgcaccaaggtgcggcttggtttttcaagcaacacaggtgacgctgagggagaattg
acgaaagtcagcacccgcgcccttgaaagcatcaccttggatgaagtaaaacaggtgtgc
gcgcagtttgttggtgaaattcaacagacgccacccatgttttctgcattaaagaaagac
ggcaagcctttgtacgagtatgctcgcgaaggcattgaattggacagacccgctcggacc
cttttgatccatcaattggatgtcatgaaagtcgagcacaatacaatccatggtgaaagc
agttgcaccattgaactggaagtgaattgcagcaaaggcacctatgtgcgcaccttgggc
gaagacatcgccaaggccttgggcacagcgggctatctcacggaattgcgcagaacagca
attggtgacttgaaagtggaacgcgcgtacaccctggatgcacttaaggtgcttggtgaa
tcggaaaccccctttgacgctttggatgcggtgcttttcccggtagatgcccttttgggc
agcctgggcaaagtcgaattgaacaatgagtttgcgcggcggttttcgcacgggcaacgg
ttgccactgagcctggttgatgccaagccagggcgagtgcgggtgtacggagaaacgtct
gcacaggatgtgaacaccgaagttagcaatacagccttcaaaggcaattcccgattcatg
ggaacaggcattttagaaacggatgggaagggcgccttgcttcgacccgacagattgatt
caggtaaatctatga
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