Limnobacter profundi: HKT17_10990
Help
Entry
HKT17_10990 CDS
T06583
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
limn
Limnobacter profundi
Pathway
limn03030
DNA replication
limn03430
Mismatch repair
limn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HKT17_10990 (holA)
03430 Mismatch repair
HKT17_10990 (holA)
03440 Homologous recombination
HKT17_10990 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limn03032
]
HKT17_10990 (holA)
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_10990 (holA)
Enzymes [BR:
limn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HKT17_10990 (holA)
DNA replication proteins [BR:
limn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HKT17_10990 (holA)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HKT17_10990 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
DUF3560
Motif
Other DBs
NCBI-ProteinID:
QJR30195
LinkDB
All DBs
Position
2345295..2346335
Genome browser
AA seq
346 aa
AA seq
DB search
MKQIALDTWLNDGANTALPQLLCVFTDEPLFATQAADLYRQRLKKQTDYQRQIVEVDRQF
DPQEFLSLFAEASLFGDVSLVDLRINQPKLGKEAAEALAKAAQWIAAGDTGHYLLVNAPK
LNKTQEKSAGFAELLTKGTEIACRPVGADTLPGWIAQAAKRKGVQLNRETCSWLAEKTEG
NLLVAHQTIEKLALEHQGAVDIEQVQGMVANSARFNVFDLGGSLLAGDARRITRMMEGLE
AEGEAPTLVLWALQEEIRAIRDTQQAMRRGMSLSDACRQNRIWGQRQNHIAAALKRHNPG
SLQKLTAWCYAAEKTIKGMKQGNPWTLFEIIGLGVAGIEPPELWTS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagattgcgcttgacacttggttaaacgatggcgcaaacaccgctttgcctcaa
ctgctgtgcgtattcaccgatgaaccgctttttgcaacccaagccgccgacctgtaccgc
cagcgactgaaaaaacaaaccgattaccagcgccaaattgtggaagtagatcggcaattt
gacccgcaagagtttttgtcgctgtttgctgaagcatcattgtttggcgacgtttcgctg
gttgatttgagaatcaatcaacccaaactcggcaaagaagcggcagaggccttggccaaa
gcagcccagtggatcgctgcaggtgataccgggcattacctgctggtcaacgctccgaag
ctaaacaaaacccaggaaaaaagtgctggttttgcagaattgctgaccaaaggcaccgag
attgcctgccgcccagtgggcgccgacaccctacccggctggatagcacaagccgccaaa
cgcaaaggcgtacaattaaaccgtgaaacttgtagttggctggccgagaaaaccgagggt
aacctgctggtggcgcatcaaaccattgaaaagctggcacttgaacaccaaggggccgtg
gacattgaacaggtgcaaggcatggttgccaattcggcgcgtttcaatgtgttcgatttg
ggcggcagcctgctggccggggacgccagacgaattacccgaatgatggaaggcttggaa
gccgaaggggaggcccccactttggtactttgggccttgcaagaggaaattcgtgccatt
cgcgacacacagcaggccatgcggcgtggaatgtctttgtcggatgcctgccgacaaaat
agaatttggggacaaaggcaaaaccacattgcggccgccctgaaacgccacaaccctggc
agccttcaaaaactgaccgcttggtgttatgccgctgaaaaaaccatcaaaggcatgaaa
cagggcaacccctggaccctctttgagattatcggcctgggtgtggcgggcatagaaccg
cccgaattgtggaccagttga
DBGET
integrated database retrieval system
