Limnobacter profundi: HKT17_11140
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Entry
HKT17_11140 CDS
T06583
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limn03032
]
HKT17_11140 (gyrA)
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_11140 (gyrA)
Enzymes [BR:
limn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HKT17_11140 (gyrA)
DNA replication proteins [BR:
limn03032
]
Prokaryotic type
DNA Topoisomerases
HKT17_11140 (gyrA)
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HKT17_11140 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AF0941-like
Motif
Other DBs
NCBI-ProteinID:
QJR30221
LinkDB
All DBs
Position
complement(2374435..2377056)
Genome browser
AA seq
873 aa
AA seq
DB search
MDSFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM
RYTEIRLAKIAQEMLLDIDKETVDFGPNYDGSEREPKVLPARLPNLLVNGSSGIAVGMAT
NMPPHNLKEVVAACLYAIDAPECTVDDLIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV
VMRAKTHFEDLDKGNRQSIIVDELPYQVNKKSLLERIAELVSEKKIEGISDIRDESDKDG
IRVVIELKRGEVPEVILNNLYKNTQLQDTFGINMVALVDGQPRLLNLRDLIFYFLRHRRE
VITRRTVFELRKARDRGHVLEGLAVALANIDEFIAIIKAAPTPPVAKADLVAKSWDSSIV
REMLSRTELGDSGGAKAFRPEGLPARLGLQDDGMYRLSEVQAQEILNMRLQRLTGLEQDK
ILNEYKEVIDQIADLLDILSKPERINQIIKDELTSIGNEFADERRSMIEFNATELGTEDL
ITPQDMVVTLSHSGYIKSQPLTEYRAQKRGGRGKQAATTKDDDWIDYLFVANTHDTILYF
SNAGRVYWLKVYEVPQGSRTSRGRPIINMFPLAEGEKITAVLPVKSFEDEDKYVFMATSL
GTVKKSKLSDFSRPMKRGIIAVNLDEGDFLIGAAMTNGTNDVMLFSDSGKAVRFDENDVR
AMGRNARGVRGMNLEEGQRVIAMLVAESEQQSVLTATENGFGKRTPVSEYTRHGRGTKGM
IAIQTSERNGKVVSAVLVNPTDEIMLITTGGVLVRTRVSEIREMGRATQGVTLISVDEGT
WLSGLQRIVESDAEDLGEVEEGDSPDAPAATEE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcgcaaaagaaacgctcccgatcagccttgaagaggagatgcgcaggtct
tatctcgattacgccatgagcgtaatcgtggggcgggccctgccggatgtgcgtgatggc
ttaaagccggtgcaccgccgtgtgctgtttgcaatgcatgagttgaacaatgactggaat
cgagcctacaagaaatctgcccgtattgtgggtgacgtaatcggtaagtaccacccacac
ggtgattctgcggtttacgacaccattgtgcgtatggcacaagatttttcattgcgctac
atgttggttgatggtcaaggtaacttcggttcaatcgatggtgataacgcggcggccatg
cgttacaccgaaattcgcctcgccaaaattgcccaggaaatgctgctggacatcgacaag
gaaaccgtcgatttcgggccaaactatgacggcagcgagcgcgagcccaaagtgttgcct
gcgcgcttaccgaatttgctggtcaatggttcgtcaggcatcgctgtgggcatggccacc
aacatgcccccccataacctgaaagaagtggttgctgcctgcctttatgcgattgatgcc
ccggagtgcacggttgatgacctaatcgagttgattcctgcgccagatttccccaccgcg
ggcattatttatggcattcaaggcgtgcgcgaaggctatcgaaccggccgcggccgtgtg
gtcatgcgggcaaaaacccattttgaagatctggacaaaggcaaccgccaatccattatc
gtggatgagctgccttatcaggtgaacaagaaatcactgcttgagcggatcgccgagctg
gtgtctgaaaagaagattgaaggtatttctgacatccgtgacgagtccgacaaagatggt
attcgcgtcgtgattgaattgaaacgtggcgaggtgcccgaggttattttgaataacctc
tacaagaacacccagcttcaggacaccttcggtatcaacatggtcgcgctggtcgatggc
cagccccgtttgttgaacttgcgcgaccttattttctatttcctgcgccatcgtcgagag
gtcatcacccgccgcaccgtgtttgaattgcgcaaagcccgcgatcgcggccacgtcttg
gaaggcttggctgtggctttggccaatattgacgaattcatcgcaatcatcaaggccgcg
cccacaccacccgtggcgaaagccgatttggttgcaaaaagctgggattcctcgattgtt
cgcgaaatgctgtcgcgtaccgaactgggcgattcgggtggtgcgaaagcgttccgccca
gaaggtttgccggcacgcctgggattgcaagacgatggcatgtaccgcttgagcgaagtg
caggcgcaggaaattttgaacatgcgcttgcagcgcttgacgggccttgagcaagacaaa
attttgaatgagtacaaggaagtgatcgatcagattgctgacctgctcgatattttgtcc
aagcctgagcgtatcaatcagatcatcaaagatgaactgacatcgattggcaacgagttt
gccgatgagcgtcgttcgatgatcgaattcaatgccactgaactgggtaccgaagacctg
atcaccccgcaagacatggtggtaactctgtctcattctggttatatcaagagccagcca
ttgactgaataccgagcgcaaaagcgcggtggacgcggaaaacaggctgccaccacgaag
gacgacgattggattgattacctgttcgtggccaacacccacgacacaattttgtacttc
agcaacgccggtcgcgtgtattggctcaaggtgtatgaagtgcctcaaggctcgcgcact
tcacgtggtcgccccatcatcaatatgttccccttggccgagggtgaaaaaatcaccgca
gtgttgccggttaaaagctttgaagacgaagacaaatacgtgttcatggccaccagcctg
ggtacagttaaaaagtcaaagttaagcgatttttcaaggcccatgaagcgcggcattatt
gccgtgaatttggatgaaggtgacttcctgatcggtgcagccatgaccaacggcaccaac
gatgtcatgttgttcagcgattccggcaaggctgttcgcttcgatgaaaatgatgtgcgc
gccatgggtcgcaatgcacgcggtgttcgcggcatgaatcttgaagaagggcagcgagtc
attgccatgctggtagcagaaagtgagcagcaatcagtgctcaccgccactgagaacggt
tttggaaagcgcacgccagtttccgagtacacccgacatggtcgtggtaccaaaggcatg
atcgcgattcaaacttctgagcgcaatggcaaagttgtctctgcagtgctggtgaaccca
acggatgaaatcatgttgatcaccaccggtggtgtgctggttcgaactcgtgtctcggaa
attcgtgaaatgggtcgcgcaacacagggcgtgaccttgatcagcgtggacgagggtaca
tggttgtctggcttgcagcggatcgtggagtcagatgctgaggatcttggtgaggtggaa
gagggggattctcccgacgcgcccgctgccacagaagagtaa
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