Limnobacter profundi: HKT17_11365
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Entry
HKT17_11365 CDS
T06583
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limn03009
]
HKT17_11365
Enzymes [BR:
limn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HKT17_11365
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HKT17_11365
Ribosome biogenesis [BR:
limn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HKT17_11365
23S rRNA modification factors
HKT17_11365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QJR30254
LinkDB
All DBs
Position
2423944..2424744
Genome browser
AA seq
266 aa
AA seq
DB search
MRADLALVEKGLCPSRAQAQILIEQGKVQVRNGVVQAPVVVKKASQQIEPFMTLELIDCD
APSFVSRGGLKLHHALEATKIEVHARRCIDLGQSTGGFTDCLLQKGASSVVGIDVGREQL
HPRLRGHHAVMALEGINLYKVNAGDLEKDIAALKPEFMPFDIAVADLSFISLRKVLPNIA
KLMPARCEGLFLVKPQFEVGPENIGKNGLVKNLDDLIEQLENDIKTCCAQLDLTVKDFFQ
CELKGGDGNQEYFVYATKSIDVATNH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgctgaccttgccttggttgaaaaaggcctgtgtccctcacgggcgcaggcacaa
atattgatcgaacaaggaaaagtgcaagtgcgcaacggtgtagttcaggcacctgttgtt
gtaaaaaaagcatcgcagcagatcgagccattcatgactcttgaattgattgactgcgat
gcacccagttttgtatcccgtggtggattgaaattacaccacgcacttgaagccaccaag
attgaagttcacgcaaggcgttgcatcgacttgggacaatccactggcggcttcactgac
tgcctacttcagaaaggtgcatcgagtgtcgtgggtattgacgttgggcgggaacagtta
caccctcgtttgagaggacaccacgctgtgatggccctggaggggatcaacctgtacaaa
gtcaatgcaggtgatctcgaaaaggacattgccgcgctgaaaccagaattcatgccattt
gacattgcggtggcggatttgagcttcatctctctgcgcaaggtgttgcccaatattgca
aagctgatgcctgcaaggtgtgaaggtttgtttctggttaaacctcaatttgaagttggg
ccggaaaacatcggtaaaaatggtttggtgaaaaatctcgatgacctgatcgaacaacta
gagaacgatataaagacttgctgcgcccaactcgacttgactgtgaaagattttttccag
tgcgagttgaaaggtggcgacggcaatcaggaatattttgtgtacgcgacgaaaagtatc
gatgttgcgaccaaccactaa
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