Limnobacter profundi: HKT17_11510
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Entry
HKT17_11510 CDS
T06583
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_11510 (miaB)
Enzymes [BR:
limn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HKT17_11510 (miaB)
Transfer RNA biogenesis [BR:
limn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HKT17_11510 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QJR30282
LinkDB
All DBs
Position
complement(2453783..2455150)
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AA seq
455 aa
AA seq
DB search
MVAHFRQTMTSKKKLFIKTFGCQMNEYDSDKMADVLGSSDGLERTNTPDDADIILFNTCS
VREKAQEKVFSDLGRVKHLKKSNPNLIIGVGGCVASQEGKAIVERAPYVDVVFGPQTLHR
LPQLIKQRRDTHRPQVDISFPEIEKFDNLPLAKNTGATAFVSIMEGCSKYCSFCVVPYTR
GEEISRPFDDVLTEIADLADQGVREINLLGQNVNAYRGKMGDTSEIADFALLLEYVSEVP
GVERIRFTTSHPKEFGPRLIEAYARLPKLVDHLHLPVQAGSDRILAAMKRGYTALEYKSI
IRKLREIRPNISMSSDFIVGFPGESEADFEKTMDLINAVGFDTSFSFVYSPRPGTPAADL
EDGVDQVTKLKRLARLQKTIQDHATSISKSMVGTRQKVLVEGPSRKDPAELAGRTENNRV
VNFAGNARMVGQIVELDIVEAYPNSLRGQVPITAA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtggcacattttaggcaaaccatgacttccaagaaaaagctcttcatcaaaaccttt
ggctgccagatgaatgagtatgactccgacaaaatggccgacgtgctgggtagttcagac
gggctggagcgaacgaacaccccagatgatgcggatatcattttgttcaatacctgttcg
gtgcgtgaaaaagcgcaggaaaaggtgttcagcgatttggggcgtgtcaagcacctgaaa
aaatccaaccccaacctgattattggtgtgggcggctgtgtggccagccaggaaggcaag
gccattgttgagcgtgcgccgtatgtcgacgtggtgtttggtcctcaaaccttgcaccga
ttgccgcaattgatcaagcagcgccgggatacgcacaggccacaggtggacatttctttt
cctgagatcgagaagttcgacaatttgcccttggccaaaaacaccggtgccactgcattt
gtgtccatcatggaaggctgcagcaagtactgtagtttctgtgtggttccctacacgcgc
ggtgaagaaatttcccgcccatttgacgatgtactgactgaaattgccgatcttgcagac
caaggcgtgcgagaaatcaatttgcttgggcaaaacgtgaatgcctaccgcgggaaaatg
ggcgatacaagcgagatagccgattttgctctgctgcttgagtacgtctcggaagtgccg
ggcgtcgaacgaatccgttttaccacttcgcaccccaaagagtttggcccacgcctgatc
gaagcctatgcgaggctgcccaagctggttgaccatcttcatttgccggttcaggcaggt
tcagaccgcattctcgccgccatgaaacgtgggtacaccgcacttgaatacaagtcgatc
attcgcaagctgcgtgaaattcgccccaatatatccatgtcgtctgatttcatcgttggc
tttcctggtgaatccgaggccgattttgaaaaaaccatggacttgatcaatgccgtgggt
ttcgacacctctttttcttttgtgtacagcccgcgccccggaacgcctgcagcggatttg
gaagacggtgtcgaccaggttaccaagctcaagcgtttggcccgcctgcaaaaaacaatc
caagaccatgccaccagcattagcaagtcgatggttggcactcgtcagaaggtattggtc
gaagggccatccagaaaagaccccgccgagttggcgggacgtaccgagaacaatcgggtg
gtcaactttgccggaaatgcccgaatggtgggacagatcgttgagttggacattgtcgag
gcttatcccaattccctgagggggcaagtgccaatcacggctgcctga
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