Limnobacter profundi: HKT17_11990
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Entry
HKT17_11990 CDS
T06583
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
limn
Limnobacter profundi
Pathway
limn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HKT17_11990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
limn03019
]
HKT17_11990 (groL)
03110 Chaperones and folding catalysts [BR:
limn03110
]
HKT17_11990 (groL)
03029 Mitochondrial biogenesis [BR:
limn03029
]
HKT17_11990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
limn04147
]
HKT17_11990 (groL)
Enzymes [BR:
limn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HKT17_11990 (groL)
Messenger RNA biogenesis [BR:
limn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HKT17_11990 (groL)
Chaperones and folding catalysts [BR:
limn03110
]
Heat shock proteins
HSP60 / Chaperonin
HKT17_11990 (groL)
Mitochondrial biogenesis [BR:
limn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HKT17_11990 (groL)
Exosome [BR:
limn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HKT17_11990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HKT17_11990 (groL)
Exosomal proteins of breast cancer cells
HKT17_11990 (groL)
Exosomal proteins of colorectal cancer cells
HKT17_11990 (groL)
Exosomal proteins of bladder cancer cells
HKT17_11990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QJR30367
LinkDB
All DBs
Position
2555664..2557310
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVFFGDDARSRMVRGVNILANAVKVTLGPRGRNVVLERSFGSPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASRTSDNAGDGTTTATVLAQAIVKEGMKFVTAGMNPMDLKRGI
DKAVSAAIVELRALSKPCATTKAIAQVGSISANSDESIGNIIAEAMEKVGKEGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINNQEKQVVALDNPFVLLHDKKISNIRDLLPTLEQV
AKAGRPLLIIAEDIEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGVV
IAEETGMSLETVTLEHLGQAKRIEVGKENTTIIDGAGDGANIEARVKQIRGQIEESSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARAKIEGLKGLNPDQDAGIKIVLRAMEEPLRMIVTNAGEESSVVANNVMGGEGNYGYNA
ATGEYGDMVDMGVLDPTKVTRTALQNAASIASLMLTTDCMVADAADDKPSAPDMGGMGGM
GGMGGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtatttttcggcgacgacgcacgcagccgcatggtgcgtggcgta
aacatcctggccaatgcagtaaaggtaactttgggcccacgtggccgcaatgtggtgctc
gagcgttcattcggctcccccaccatcaccaaagacggtgtttccgtggccaaagaaatc
gaactgaaagacaagttcgaaaacatgggcgcacaaatggtgaaagaagttgcttctcgc
acttctgacaacgcaggtgacggtacaaccaccgccacagttctggcacaagcgattgta
aaagaaggcatgaagttcgtgaccgcaggcatgaaccccatggacctgaagcgcggtatc
gacaaggccgtaagcgctgcaatcgttgaattgcgtgcattgagcaagccatgcgccacc
accaaggcgattgcacaggttggctccatttccgccaacagcgacgaatccattggcaac
atcattgctgaagccatggaaaaagtaggcaaggaaggcgtaattactgttgaagacggc
aagagcctggacaacgaactggatgttgttgaaggcatgcagtttgaccgtggttacctg
agcccctacttcatcaacaaccaggaaaagcaggttgttgcactggacaaccccttcgtg
ctgttgcacgacaagaaaatcagcaacatccgtgatttgctgcccacactggaacaagtg
gccaaagcgggtcgcccattgttgatcattgctgaagacatcgaaggcgaagccttggcg
actttggtagtgaacaacattcgcggtatcttgaaaacttgtgcagtgaaggcgccaggc
ttcggcgatcgccgcaaagccatgctggaagacatcgccattttgactggcggcgttgta
atcgctgaagaaaccggcatgagcctggaaactgtaactctcgaacacctgggtcaggcc
aagcgcattgaagtgggcaaagagaacaccaccatcatcgacggtgccggcgacggtgca
aacatcgaagcacgcgtgaagcagattcgcggtcagatcgaagaatcttcttccgactac
gaccgtgaaaagctgcaagaacgcgtggctaaattggctggcggcgttgcagtaatcaag
gttggtgctgcaaccgaagttgaaatgaaagaaaagaaagcccgcgtagaagacgccctg
cacgcaacacgcgctgctgtggaagaaggcattgtgcctggcggcggcgtagccctgctg
cgtgcacgcgccaagattgaaggcttgaagggcttgaaccccgaccaggacgcaggtatc
aagattgtattgcgcgccatggaagagccactgcgcatgatcgtgaccaacgcgggtgag
gaatcatctgttgtggccaacaacgtgatgggcggcgaaggcaactacggttacaacgca
gccacaggcgaatacggcgacatggtggacatgggtgttttggatccaaccaaagtaact
cgcactgcattgcaaaatgcggcatctatcgcatcgctgatgttgaccaccgattgcatg
gttgctgatgcggctgatgacaagccttcagcacctgacatgggtggtatgggcggaatg
ggtggtatgggcggcatgggcatgtaa
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