Limnobacter profundi: HKT17_12740
Help
Entry
HKT17_12740 CDS
T06583
Name
(GenBank) AAA family ATPase
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HKT17_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
OLD-like_TOPRIM
AAA_21
DUF2813
AAA_23
AAA_27
SMC_N
AAA_29
Emfourin
ABC_tran
FlK
Motif
Other DBs
NCBI-ProteinID:
QJR30502
LinkDB
All DBs
Position
2722990..2724786
Genome browser
AA seq
598 aa
AA seq
DB search
MRISRIAVENYANFENVDFATADSLVIVGENKAGKSNLLRALRLVLDPMLPDRDRQLGLE
HFWDGLGAAKLGATVKVVVEFTDFEDNDNLLTVLGGSLVDTETPVDARLTYLYRPKAALK
GAAPQTLADYEFLIFGGTNEDNVFTAARRRELPMDYLFALRDAEGDLLNWRRSPLRPIIE
ELTASLNDETREEIQQLVSNAQNSLAQRPEVSAAAAKVYDRLVEMVGDEHAVSLTLGATP
TNVDVLLRGLRLLIDGGARGIGDASLGTANLLFLTLKGLELERAVEAGERSHTFLAIEEP
EAHLHPHVQRLVYRHYLGEENDAPENVTTILTTHSPHIASVAPLRSIILLSEDAEGGSTS
ITSAAEVELLPDEEADLQRYIDVTRGELFFARGIIFVEGDAERFLIPAFAAALDIDLDAL
GVTVCSVASANFLPYVKLVCPDALGIPFVILTDLDPQDAGAPLAFDRVRDILALSMEQED
IDQYEEFDDIWEDGELNGIFVNDKTLEVELFQAGMGPAMVPILEKHAKTWGAQRKAMMKG
WIDDPTTLDEEKLLGWVGEVSKGRFAQALAGSATDAVCPEYIKKALTFVTNGFSPVES
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattagtcgaatcgcggtcgagaactacgccaacttcgagaacgtcgacttcgcg
acggccgacagcttggtgattgtcggcgagaacaaggcaggcaagagcaacctgctcagg
gctttgcgcctagtgctcgaccctatgctccctgaccgtgaccggcagctgggtcttgag
cacttttgggacggattaggcgctgcgaagctaggtgctaccgtcaaagtggtcgttgag
ttcacagacttcgaggacaacgacaacctgctcaccgtgttgggtggcagcttggtggac
accgagacgccagtcgacgcgcggctgacctacctgtatcgccccaaggccgcgcttaaa
ggcgctgcgccgcagaccttggcggactacgaatttctcatattcggcggcaccaacgag
gacaacgtctttacggctgctcgcaggcgcgagttgccgatggattacctgtttgccctg
cgtgacgccgaaggcgacctgctgaactggaggcgttcgcctctgcggcccattatcgag
gagctgacggccagtttgaatgacgagactcgcgaggaaatccagcagcttgtcagcaat
gcccagaacagcctcgcgcagcgccctgaggtctctgctgccgcagcaaaggtttacgac
cggcttgtggagatggtcggcgacgaacacgccgtctccttgacgctgggcgcgaccccg
accaatgtggacgtactgctgcggggcttgcggcttctaatcgacgggggcgcccgcggc
attggcgacgcaagcttgggaacggcgaacctgctcttcttgacccttaaggggctggag
ctcgagcgagcggtcgaagcaggcgagcgcagtcacacgttcctagctatcgaggagccg
gaggcccatctccatccgcacgttcagcggctggtgtacaggcactacctcggcgaggag
aacgacgcgccggagaacgttaccaccatcttaacgacccattcgccgcacatcgcgagc
gtcgcgcccctgcgctctatcatcctgctgagtgaggacgcggaaggtgggtcgacctcc
attacgtccgcggccgaggtggagttgctgcctgacgaggaggccgacctgcagcgctac
atcgacgtcacccggggcgagcttttcttcgcgcgcggcatcatcttcgtggaaggcgac
gctgagcgattcctaatccccgcctttgcagcggcgctcgacatcgaccttgacgcactt
ggggtcacggtgtgctccgtggccagcgccaacttcctgccgtacgtgaagctggtatgc
cctgatgctttgggcatcccctttgtcatcttgacggacctcgatccccaggacgcgggc
gcgccgcttgcctttgacagagttcgggatatcttggccctgtcgatggagcaggaggac
atcgaccaatacgaggagttcgacgacatctgggaagacggcgagttgaatggcatcttc
gtcaacgacaaaacgctggaggtcgagctgtttcaggctggaatgggccctgcgatggtg
cccatcctggagaagcacgcgaaaacctggggtgcccagcgcaaagccatgatgaagggc
tggattgacgacccgacgacgctagatgaggaaaaactcctgggctgggtcggcgaggtc
agtaaaggccgctttgcgcaggcgctggccggctccgccactgatgcggtctgccccgag
tacatcaagaaggcactgaccttcgtgacgaatggcttctccccagtcgagtcctga
DBGET
integrated database retrieval system
